1dw9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:54, 20 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1dw9.png|left|200px]]
 
-
<!--
+
==Structure of cyanase reveals that a novel dimeric and decameric arrangement of subunits is required for formation of the enzyme active site==
-
The line below this paragraph, containing "STRUCTURE_1dw9", creates the "Structure Box" on the page.
+
<StructureSection load='1dw9' size='340' side='right'caption='[[1dw9]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1dw9]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DW9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DW9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1dw9| PDB=1dw9 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dw9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dw9 OCA], [https://pdbe.org/1dw9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dw9 RCSB], [https://www.ebi.ac.uk/pdbsum/1dw9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dw9 ProSAT], [https://www.topsan.org/Proteins/MCSG/1dw9 TOPSAN]</span></td></tr>
-
 
+
</table>
-
===STRUCTURE OF CYANASE REVEALS THAT A NOVEL DIMERIC AND DECAMERIC ARRANGEMENT OF SUBUNITS IS REQUIRED FOR FORMATION OF THE ENZYME ACTIVE SITE===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CYNS_ECOLI CYNS_ECOLI] Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_10801492}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 10801492 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dw/1dw9_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_10801492}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1dw9]] is a 10 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DW9 OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dw9 ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:010801492</ref><ref group="xtra">PMID:002822670</ref><ref group="xtra">PMID:003518792</ref><ref group="xtra">PMID:003651424</ref><ref group="xtra">PMID:006994799</ref><references group="xtra"/>
+
</StructureSection>
-
[[Category: Cyanase]]
+
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
-
[[Category: Anderson, P M.]]
+
[[Category: Large Structures]]
-
[[Category: Joachimiak, A.]]
+
[[Category: Anderson PM]]
-
[[Category: Mcsg, Midwest Center for Structural Genomics.]]
+
[[Category: Joachimiak A]]
-
[[Category: Otwinowski, Z.]]
+
[[Category: Otwinowski Z]]
-
[[Category: Perrakis, A.]]
+
[[Category: Perrakis A]]
-
[[Category: Walsh, M A.]]
+
[[Category: Walsh MA]]
-
[[Category: Cyanate degradation]]
+
-
[[Category: Lyase]]
+
-
[[Category: Mcsg]]
+
-
[[Category: Midwest center for structural genomic]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Structure of cyanase reveals that a novel dimeric and decameric arrangement of subunits is required for formation of the enzyme active site

PDB ID 1dw9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools