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3r1m
From Proteopedia
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| - | [[Image:3r1m.png|left|200px]] | ||
| - | < | + | ==Structure of bifunctional fructose 1,6-bisphosphate aldolase/phosphatase (aldolase form)== |
| - | + | <StructureSection load='3r1m' size='340' side='right'caption='[[3r1m]], [[Resolution|resolution]] 1.50Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | or | + | <table><tr><td colspan='2'>[[3r1m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R1M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3R1M FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5Å</td></tr> | |
| - | -- | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=13P:1,3-DIHYDROXYACETONEPHOSPHATE'>13P</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3r1m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r1m OCA], [https://pdbe.org/3r1m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3r1m RCSB], [https://www.ebi.ac.uk/pdbsum/3r1m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3r1m ProSAT]</span></td></tr> | |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/FBPAP_SULTO FBPAP_SULTO] Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).<ref>PMID:15274916</ref> <ref>PMID:20348906</ref> <ref>PMID:21983966</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Enzymes catalyse specific reactions and are essential for maintaining life. Although some are referred to as being bifunctional, they consist of either two distinct catalytic domains or a single domain that displays promiscuous substrate specificity. Thus, one enzyme active site is generally responsible for one biochemical reaction. In contrast to this conventional concept, archaeal fructose-1,6-bisphosphate (FBP) aldolase/phosphatase (FBPA/P) consists of a single catalytic domain, but catalyses two chemically distinct reactions of gluconeogenesis: (1) the reversible aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3-phosphate (GA3P) to FBP; (2) the dephosphorylation of FBP to fructose-6-phosphate (F6P). Thus, FBPA/P is fundamentally different from ordinary enzymes whose active sites are responsible for a specific reaction. However, the molecular mechanism by which FBPA/P achieves its unusual bifunctionality remains unknown. Here we report the crystal structure of FBPA/P at 1.5-A resolution in the aldolase form, where a critical lysine residue forms a Schiff base with DHAP. A structural comparison of the aldolase form with a previously determined phosphatase form revealed a dramatic conformational change in the active site, demonstrating that FBPA/P metamorphoses its active-site architecture to exhibit dual activities. Thus, our findings expand the conventional concept that one enzyme catalyses one biochemical reaction. | ||
| - | + | Structural basis for the bifunctionality of fructose-1,6-bisphosphate aldolase/phosphatase.,Fushinobu S, Nishimasu H, Hattori D, Song HJ, Wakagi T Nature. 2011 Oct 9;478(7370):538-41. doi: 10.1038/nature10457. PMID:21983966<ref>PMID:21983966</ref> | |
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | == | + | </div> |
| - | + | <div class="pdbe-citations 3r1m" style="background-color:#fffaf0;"></div> | |
| - | [[Category: | + | == References == |
| - | [[Category: Fushinobu | + | <references/> |
| - | [[Category: Hattori | + | __TOC__ |
| - | [[Category: Nishimasu | + | </StructureSection> |
| - | [[Category: Song | + | [[Category: Large Structures]] |
| - | [[Category: Wakagi | + | [[Category: Sulfurisphaera tokodaii str. 7]] |
| - | + | [[Category: Fushinobu S]] | |
| - | + | [[Category: Hattori D]] | |
| - | + | [[Category: Nishimasu H]] | |
| - | + | [[Category: Song H-J]] | |
| - | + | [[Category: Wakagi T]] | |
Current revision
Structure of bifunctional fructose 1,6-bisphosphate aldolase/phosphatase (aldolase form)
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