3teo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:42, 30 October 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3teo.png|left|200px]]
 
-
<!--
+
==APO Form of carbon disulfide hydrolase (selenomethionine form)==
-
The line below this paragraph, containing "STRUCTURE_3teo", creates the "Structure Box" on the page.
+
<StructureSection load='3teo' size='340' side='right'caption='[[3teo]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3teo]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidianus_sp._A1-3 Acidianus sp. A1-3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TEO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TEO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PE3:3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL'>PE3</scene></td></tr>
-
{{STRUCTURE_3teo| PDB=3teo | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3teo FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3teo OCA], [https://pdbe.org/3teo PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3teo RCSB], [https://www.ebi.ac.uk/pdbsum/3teo PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3teo ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CS2H_ACIS1 CS2H_ACIS1] Catalyzes the conversion of carbon disulfide into hydrogen sulfide and carbon dioxide, with carbonyl sulfide as an intermediate. Likely plays a key role in sulfur metabolism that allows Acidianus sp. A1-3 to grow on carbon disulfide as the main carbon and energy source. Does not show carbonic anhydrase activity (hydration of CO(2) to carbonate).<ref>PMID:22012399</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Extremophilic organisms require specialized enzymes for their exotic metabolisms. Acid-loving thermophilic Archaea that live in the mudpots of volcanic solfataras obtain their energy from reduced sulphur compounds such as hydrogen sulphide (H(2)S) and carbon disulphide (CS(2)). The oxidation of these compounds into sulphuric acid creates the extremely acidic environment that characterizes solfataras. The hyperthermophilic Acidianus strain A1-3, which was isolated from the fumarolic, ancient sauna building at the Solfatara volcano (Naples, Italy), was shown to rapidly convert CS(2) into H(2)S and carbon dioxide (CO(2)), but nothing has been known about the modes of action and the evolution of the enzyme(s) involved. Here we describe the structure, the proposed mechanism and evolution of a CS(2) hydrolase from Acidianus A1-3. The enzyme monomer displays a typical beta-carbonic anhydrase fold and active site, yet CO(2) is not one of its substrates. Owing to large carboxy- and amino-terminal arms, an unusual hexadecameric catenane oligomer has evolved. This structure results in the blocking of the entrance to the active site that is found in canonical beta-carbonic anhydrases and the formation of a single 15-A-long, highly hydrophobic tunnel that functions as a specificity filter. The tunnel determines the enzyme's substrate specificity for CS(2), which is hydrophobic. The transposon sequences that surround the gene encoding this CS(2) hydrolase point to horizontal gene transfer as a mechanism for its acquisition during evolution. Our results show how the ancient beta-carbonic anhydrase, which is central to global carbon metabolism, was transformed by divergent evolution into a crucial enzyme in CS(2) metabolism.
-
===APO Form of carbon disulfide hydrolase (selenomethionine form)===
+
Evolution of a new enzyme for carbon disulphide conversion by an acidothermophilic archaeon.,Smeulders MJ, Barends TR, Pol A, Scherer A, Zandvoort MH, Udvarhelyi A, Khadem AF, Menzel A, Hermans J, Shoeman RL, Wessels HJ, van den Heuvel LP, Russ L, Schlichting I, Jetten MS, Op den Camp HJ Nature. 2011 Oct 19;478(7369):412-6. doi: 10.1038/nature10464. PMID:22012399<ref>PMID:22012399</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
==About this Structure==
+
</div>
-
[[3teo]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Archaea Archaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TEO OCA].
+
<div class="pdbe-citations 3teo" style="background-color:#fffaf0;"></div>
-
[[Category: Archaea]]
+
== References ==
-
[[Category: Barends, T R.M B.]]
+
<references/>
-
[[Category: Camp, H J.MOp den.]]
+
__TOC__
-
[[Category: Hermans, J.]]
+
</StructureSection>
-
[[Category: Heuvel, L P.van den.]]
+
[[Category: Acidianus sp. A1-3]]
-
[[Category: Jetten, M S.M.]]
+
[[Category: Large Structures]]
-
[[Category: Khadem, A.]]
+
[[Category: Barends TRMB]]
-
[[Category: Menzel, A.]]
+
[[Category: Hermans J]]
-
[[Category: Pol, A.]]
+
[[Category: Jetten MSM]]
-
[[Category: Russ, L.]]
+
[[Category: Khadem A]]
-
[[Category: Scherer, A.]]
+
[[Category: Menzel A]]
-
[[Category: Schlichting, I.]]
+
[[Category: Op den Camp HJM]]
-
[[Category: Shoeman, R L.]]
+
[[Category: Pol A]]
-
[[Category: Smeulders, M J.]]
+
[[Category: Russ L]]
-
[[Category: Udvarhelyi, A.]]
+
[[Category: Scherer A]]
-
[[Category: Wessels, H J.C T.]]
+
[[Category: Schlichting I]]
-
[[Category: Zandvoort, M H.]]
+
[[Category: Shoeman RL]]
-
[[Category: Beta carbonic anhydrase fold]]
+
[[Category: Smeulders MJ]]
-
[[Category: Carbon disulfide hydrolysis]]
+
[[Category: Udvarhelyi A]]
-
[[Category: Hydrolase]]
+
[[Category: Wessels HJCT]]
 +
[[Category: Zandvoort MH]]
 +
[[Category: Van den Heuvel LP]]

Current revision

APO Form of carbon disulfide hydrolase (selenomethionine form)

PDB ID 3teo

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools