This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3sqx

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:05, 14 March 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3sqx.png|left|200px]]
 
-
<!--
+
==Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP==
-
The line below this paragraph, containing "STRUCTURE_3sqx", creates the "Structure Box" on the page.
+
<StructureSection load='3sqx' size='340' side='right'caption='[[3sqx]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3sqx]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SQX OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3SQX FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.112&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ANP:PHOSPHOAMINOPHOSPHONIC+ACID-ADENYLATE+ESTER'>ANP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-
{{STRUCTURE_3sqx| PDB=3sqx | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3sqx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sqx OCA], [https://pdbe.org/3sqx PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3sqx RCSB], [https://www.ebi.ac.uk/pdbsum/3sqx PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3sqx ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MS116_YEAST MS116_YEAST] ATP-dependent RNA helicase required for mitochondrial splicing of group I and II introns. Specifically involved in the ATP-dependent splicing of the bl1 intron of COB. Also required for efficient mitochondrial translation.<ref>PMID:2535893</ref> <ref>PMID:7567443</ref> <ref>PMID:12402239</ref> <ref>PMID:15618406</ref>
-
===Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP===
+
==See Also==
-
 
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
 
+
*[[Helicase 3D structures|Helicase 3D structures]]
-
<!--
+
== References ==
-
The line below this paragraph, {{ABSTRACT_PUBMED_21945532}}, adds the Publication Abstract to the page
+
<references/>
-
(as it appears on PubMed at http://www.pubmed.gov), where 21945532 is the PubMed ID number.
+
__TOC__
-
-->
+
</StructureSection>
-
{{ABSTRACT_PUBMED_21945532}}
+
[[Category: Large Structures]]
-
 
+
[[Category: Saccharomyces cerevisiae S288C]]
-
==About this Structure==
+
[[Category: Del Campo M]]
-
[[3sqx]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_s288c Saccharomyces cerevisiae s288c]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SQX OCA].
+
[[Category: Lambowitz AM]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:021945532</ref><references group="xtra"/>
+
-
[[Category: RNA helicase]]
+
-
[[Category: Saccharomyces cerevisiae s288c]]
+
-
[[Category: Campo, M Del.]]
+
-
[[Category: Lambowitz, A M.]]
+
-
[[Category: Dead-box protein]]
+
-
[[Category: Hydrolase-rna complex]]
+
-
[[Category: Mitochondrion]]
+
-
[[Category: Reca fold]]
+
-
[[Category: Rna dependent atpase]]
+
-
[[Category: Rna helicase]]
+

Current revision

Structure of Mss116p (NTE and C-tail double deletion) bound to ssRNA and AMP-PNP

PDB ID 3sqx

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3sqx"
Personal tools