1oa7

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[[Image:1oa7.jpg|left|200px]]<br /><applet load="1oa7" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="1oa7, resolution 2.0&Aring;" />
 
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'''STRUCTURE OF MELANOCARPUS ALBOMYCES ENDOGLUCANASE IN COMPLEX WITH CELLOBIOSE'''<br />
 
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==Overview==
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==Structure of Melanocarpus albomyces endoglucanase in complex with cellobiose==
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Cellulose, a polysaccharide of beta-1,4-linked D-glucosyl units, is the, major component of plant cell walls and one of the most abundant, biopolymers in nature. Cellulases (cellobiohydrolases and endoglucanases), are enzymes that catalyse the hydrolysis of cellulose to smaller, oligosaccharides, a process of paramount importance in biotechnology. The, thermophilic fungus Melanocarpus albomyces produces a 20 kDa endoglucanase, known as 20K-cellulase that has been found particularly useful in the, textile industry. The crystal structures of free 20K-cellulase and its, complex with cellobiose have been determined at 2.0 A resolution. The, enzyme, classified into the glycoside hydrolase family 45, exhibits the, characteristic six-stranded beta-barrel found before in Humicola insolens, endoglucanase V structure. However, the active site in the 20K-cellulase, shows a closing of approximately 2.5-3.5A while a mobile loop identified, previously in Humicola insolens endoglucanase V and implicated in the, catalytic mechanism is well-defined in 20K-cellulase. In addition, the, crystal structure of the cellobiose complex shows a shift in the, cellobiose position at the substrate-binding cleft. It is therefore, proposed that these alterations may reflect differences in the binding, mechanism and catalytic action of the enzyme.
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<StructureSection load='1oa7' size='340' side='right'caption='[[1oa7]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1oa7]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Melanocarpus_albomyces Melanocarpus albomyces]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OA7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OA7 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=PRD_900005:beta-cellobiose'>PRD_900005</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oa7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oa7 OCA], [https://pdbe.org/1oa7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oa7 RCSB], [https://www.ebi.ac.uk/pdbsum/1oa7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oa7 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8J0K8_MELAO Q8J0K8_MELAO]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oa/1oa7_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1oa7 ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Cellulose, a polysaccharide of beta-1,4-linked D-glucosyl units, is the major component of plant cell walls and one of the most abundant biopolymers in nature. Cellulases (cellobiohydrolases and endoglucanases) are enzymes that catalyse the hydrolysis of cellulose to smaller oligosaccharides, a process of paramount importance in biotechnology. The thermophilic fungus Melanocarpus albomyces produces a 20 kDa endoglucanase known as 20K-cellulase that has been found particularly useful in the textile industry. The crystal structures of free 20K-cellulase and its complex with cellobiose have been determined at 2.0 A resolution. The enzyme, classified into the glycoside hydrolase family 45, exhibits the characteristic six-stranded beta-barrel found before in Humicola insolens endoglucanase V structure. However, the active site in the 20K-cellulase shows a closing of approximately 2.5-3.5A while a mobile loop identified previously in Humicola insolens endoglucanase V and implicated in the catalytic mechanism is well-defined in 20K-cellulase. In addition, the crystal structure of the cellobiose complex shows a shift in the cellobiose position at the substrate-binding cleft. It is therefore proposed that these alterations may reflect differences in the binding mechanism and catalytic action of the enzyme.
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==About this Structure==
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Crystal structure of a family 45 endoglucanase from Melanocarpus albomyces: mechanistic implications based on the free and cellobiose-bound forms.,Hirvonen M, Papageorgiou AC J Mol Biol. 2003 Jun 6;329(3):403-10. PMID:12767825<ref>PMID:12767825</ref>
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1OA7 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Melanocarpus_albomyces Melanocarpus albomyces] with <scene name='pdbligand=CBI:'>CBI</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Active as [http://en.wikipedia.org/wiki/Cellulase Cellulase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.4 3.2.1.4] Known structural/functional Site: <scene name='pdbsite=AC1:Cbi+Binding+Site+For+Chain+A'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OA7 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Crystal structure of a family 45 endoglucanase from Melanocarpus albomyces: mechanistic implications based on the free and cellobiose-bound forms., Hirvonen M, Papageorgiou AC, J Mol Biol. 2003 Jun 6;329(3):403-10. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=12767825 12767825]
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</div>
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[[Category: Cellulase]]
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<div class="pdbe-citations 1oa7" style="background-color:#fffaf0;"></div>
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[[Category: Melanocarpus albomyces]]
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[[Category: Single protein]]
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[[Category: Hirvonen, M.]]
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[[Category: Papageorgiou, A.C.]]
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[[Category: CBI]]
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[[Category: cellulase]]
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[[Category: cellulose degradation]]
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[[Category: glycoside hydrolases]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 09:55:29 2008''
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==See Also==
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*[[Glucanase 3D structures|Glucanase 3D structures]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Melanocarpus albomyces]]
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[[Category: Hirvonen M]]
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[[Category: Papageorgiou AC]]

Current revision

Structure of Melanocarpus albomyces endoglucanase in complex with cellobiose

PDB ID 1oa7

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