This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3pzc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:35, 1 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3pzc.png|left|200px]]
 
-
<!--
+
==Crystal structure of class II aaRS homologue (Bll0957) complexed with Coenzyme A==
-
The line below this paragraph, containing "STRUCTURE_3pzc", creates the "Structure Box" on the page.
+
<StructureSection load='3pzc' size='340' side='right'caption='[[3pzc]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3pzc]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bradyrhizobium_japonicum Bradyrhizobium japonicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PZC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3PZC FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=COA:COENZYME+A'>COA</scene>, <scene name='pdbligand=GAP:GLYCYL-ADENOSINE-5-PHOSPHATE'>GAP</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_3pzc| PDB=3pzc | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3pzc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pzc OCA], [https://pdbe.org/3pzc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3pzc RCSB], [https://www.ebi.ac.uk/pdbsum/3pzc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3pzc ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of class II aaRS homologue (Bll0957) complexed with Coenzyme A===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/AACL1_BRADU AACL1_BRADU] Catalyzes the ATP-dependent activation of L-glycine and its transfer to the phosphopantetheine prosthetic group covalently attached to the vicinal carrier protein bsr0959 of yet unknown function. May participate in nonribosomal peptide synthesis or related processes. L-alanine is a poor substrate whereas L-serine or D-amino acids are not substrates for ATP-dependent activation. Does not display tRNA aminoacylation activity.<ref>PMID:20663952</ref>
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20663952}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 20663952 is the PubMed ID number.
+
</StructureSection>
-
-->
+
-
{{ABSTRACT_PUBMED_20663952}}
+
-
 
+
-
==About this Structure==
+
-
[[3pzc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bradyrhizobium_japonicum Bradyrhizobium japonicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PZC OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:020663952</ref><references group="xtra"/>
+
[[Category: Bradyrhizobium japonicum]]
[[Category: Bradyrhizobium japonicum]]
-
[[Category: Ivic, N.]]
+
[[Category: Large Structures]]
-
[[Category: Luic, M.]]
+
[[Category: Ivic N]]
-
[[Category: Mocibob, M.]]
+
[[Category: Luic M]]
-
[[Category: Subasic, D.]]
+
[[Category: Mocibob M]]
-
[[Category: Weygand-Durasevic, I.]]
+
[[Category: Subasic D]]
-
[[Category: Carrier protein]]
+
[[Category: Weygand-Durasevic I]]
-
[[Category: Coenzyme some]]
+
-
[[Category: Ligase]]
+
-
[[Category: Seryl-trna synthetase]]
+

Current revision

Crystal structure of class II aaRS homologue (Bll0957) complexed with Coenzyme A

PDB ID 3pzc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3pzc"
Personal tools