3b03

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:03, 13 March 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3b03.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with vIPP.==
-
The line below this paragraph, containing "STRUCTURE_3b03", creates the "Structure Box" on the page.
+
<StructureSection load='3b03' size='340' side='right'caption='[[3b03]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3b03]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_shibatae Saccharolobus shibatae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B03 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3B03 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=VNR:1-DEOXY-1-[(4AR)-4A-[(2Z)-2-(2-{[(S)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}ETHYL)BUT-2-EN-1-YL]-7,8-DIMETHYL-2,4-DIOXO-3,4,4A,5-TETRAHYDROBENZO[G]PTERIDIN-10(2H)-YL]-5-O-PHOSPHONO-D-RIBITOL'>VNR</scene></td></tr>
-
{{STRUCTURE_3b03| PDB=3b03 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3b03 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3b03 OCA], [https://pdbe.org/3b03 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3b03 RCSB], [https://www.ebi.ac.uk/pdbsum/3b03 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3b03 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IDI2_SACSH IDI2_SACSH] Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).[HAMAP-Rule:MF_00354]<ref>PMID:19158086</ref> <ref>PMID:22158896</ref> <ref>PMID:22505674</ref>
-
===Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with vIPP.===
+
==See Also==
-
 
+
*[[Isopentenyl-diphosphate delta-isomerase|Isopentenyl-diphosphate delta-isomerase]]
-
 
+
*[[Nucleoprotein 3D structures|Nucleoprotein 3D structures]]
-
<!--
+
== References ==
-
The line below this paragraph, {{ABSTRACT_PUBMED_018408159}}, adds the Publication Abstract to the page
+
<references/>
-
(as it appears on PubMed at http://www.pubmed.gov), where 018408159 is the PubMed ID number.
+
__TOC__
-
-->
+
</StructureSection>
-
{{ABSTRACT_PUBMED_018408159}}
+
[[Category: Large Structures]]
-
 
+
[[Category: Saccharolobus shibatae]]
-
==About this Structure==
+
[[Category: Hemmi H]]
-
[[3b03]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_shibatae Sulfolobus shibatae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3B03 OCA].
+
[[Category: Nagai T]]
-
 
+
[[Category: Unno H]]
-
==Reference==
+
-
<ref group="xtra">PMID:018408159</ref><references group="xtra"/>
+
-
[[Category: Isopentenyl-diphosphate Delta-isomerase]]
+
-
[[Category: Sulfolobus shibatae]]
+
-
[[Category: Hemmi, H.]]
+
-
[[Category: Nagai, T.]]
+
-
[[Category: Unno, H.]]
+
-
[[Category: Fmn]]
+
-
[[Category: Idi]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Isopentenyl diphosphate isomerase]]
+
-
[[Category: Type 2]]
+
-
[[Category: Vipp]]
+

Current revision

Crystal structure of Sulfolobus shibatae isopentenyl diphosphate isomerase in complex with vIPP.

PDB ID 3b03

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3b03"
Personal tools