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1p9p

From Proteopedia

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[[Image:1p9p.png|left|200px]]
 
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==The Crystal Structure of a M1G37 tRNA Methyltransferase, TrmD==
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The line below this paragraph, containing "STRUCTURE_1p9p", creates the "Structure Box" on the page.
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<StructureSection load='1p9p' size='340' side='right'caption='[[1p9p]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1p9p]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P9P OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1P9P FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
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{{STRUCTURE_1p9p| PDB=1p9p | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1p9p FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1p9p OCA], [https://pdbe.org/1p9p PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1p9p RCSB], [https://www.ebi.ac.uk/pdbsum/1p9p PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1p9p ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TRMD_ECOLI TRMD_ECOLI] Specifically methylates guanosine-37 in various tRNAs.<ref>PMID:14583191</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/1p9p_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1p9p ConSurf].
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<div style="clear:both"></div>
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===The Crystal Structure of a M1G37 tRNA Methyltransferase, TrmD===
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==See Also==
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*[[TRNA methyltransferase 3D structures|TRNA methyltransferase 3D structures]]
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== References ==
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<references/>
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The line below this paragraph, {{ABSTRACT_PUBMED_14583191}}, adds the Publication Abstract to the page
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__TOC__
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(as it appears on PubMed at http://www.pubmed.gov), where 14583191 is the PubMed ID number.
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</StructureSection>
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[[Category: Escherichia coli K-12]]
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{{ABSTRACT_PUBMED_14583191}}
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[[Category: Large Structures]]
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[[Category: Andraos-Selim C]]
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==About this Structure==
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[[Category: Elkins PA]]
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[[1p9p]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1P9P OCA].
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[[Category: Holmes WM]]
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[[Category: Rastinejad F]]
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==Reference==
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[[Category: Redlak M]]
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<ref group="xtra">PMID:014583191</ref><references group="xtra"/>
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[[Category: Van Thiel A]]
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[[Category: Escherichia coli]]
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[[Category: Vitaszka PR]]
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[[Category: Andraos-Selim, C.]]
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[[Category: Watts JM]]
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[[Category: Elkins, P A.]]
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[[Category: Zalacain M]]
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[[Category: Holmes, W M.]]
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[[Category: Rastinejad, F.]]
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[[Category: Redlak, M.]]
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[[Category: Thiel, A Van.]]
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[[Category: Vitaszka, P R.]]
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[[Category: Watts, J M.]]
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[[Category: Zalacain, M.]]
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[[Category: Adomet]]
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[[Category: Knot]]
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[[Category: Methyltransferase]]
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[[Category: S-adenosylmethionine]]
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[[Category: Spou]]
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[[Category: Spout]]
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[[Category: Transferase]]
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Current revision

The Crystal Structure of a M1G37 tRNA Methyltransferase, TrmD

PDB ID 1p9p

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