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3zyi

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Current revision (11:16, 20 December 2023) (edit) (undo)
 
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[[Image:3zyi.png|left|200px]]
 
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==NetrinG2 in complex with NGL2==
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The line below this paragraph, containing "STRUCTURE_3zyi", creates the "Structure Box" on the page.
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<StructureSection load='3zyi' size='340' side='right'caption='[[3zyi]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3zyi]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3ZYI FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
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{{STRUCTURE_3zyi| PDB=3zyi | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3zyi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zyi OCA], [https://pdbe.org/3zyi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3zyi RCSB], [https://www.ebi.ac.uk/pdbsum/3zyi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3zyi ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/LRRC4_HUMAN LRRC4_HUMAN] Synaptic adhesion protein. Regulates the formation of exitatory synapses through the recruitment of pre-and-postsynaptic proteins. Organize the lamina/pathway-specific differentiation of dendrites. Plays a important role for auditory synaptic responses. Involved in the suppression of glioma (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Brain wiring depends on cells making highly localized and selective connections through surface protein-protein interactions, including those between NetrinGs and NetrinG ligands (NGLs). The NetrinGs are members of the structurally uncharacterized netrin family. We present a comprehensive crystallographic analysis comprising NetrinG1-NGL1 and NetrinG2-NGL2 complexes, unliganded NetrinG2 and NGL3. Cognate NetrinG-NGL interactions depend on three specificity-conferring NetrinG loops, clasped tightly by matching NGL surfaces. We engineered these NGL surfaces to implant custom-made affinities for NetrinG1 and NetrinG2. In a cellular patterning assay, we demonstrate that NetrinG-binding selectivity can direct the sorting of a mixed population of NGLs into discrete cell surface subdomains. These results provide a molecular model for selectivity-based patterning in a neuronal recognition system, dysregulation of which is associated with severe neuropsychological disorders.
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===NETRING2 IN COMPLEX WITH NGL2===
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Structural basis for cell surface patterning through NetrinG-NGL interactions.,Seiradake E, Coles CH, Perestenko PV, Harlos K, McIlhinney RA, Aricescu AR, Jones EY EMBO J. 2011 Sep 23. doi: 10.1038/emboj.2011.346. PMID:21946559<ref>PMID:21946559</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3zyi" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_21946559}}, adds the Publication Abstract to the page
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*[[Netrin|Netrin]]
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(as it appears on PubMed at http://www.pubmed.gov), where 21946559 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_21946559}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[3zyi]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZYI OCA].
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==Reference==
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<ref group="xtra">PMID:021946559</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Aricescu, A R.]]
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[[Category: Large Structures]]
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[[Category: Coles, C H.]]
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[[Category: Aricescu AR]]
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[[Category: Harlos, K.]]
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[[Category: Coles CH]]
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[[Category: Jones, E Y.]]
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[[Category: Harlos K]]
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[[Category: Mcilhinney, R A.J.]]
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[[Category: Jones EY]]
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[[Category: Perestenko, P V.]]
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[[Category: McIlhinney RAJ]]
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[[Category: Seiradake, E.]]
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[[Category: Perestenko PV]]
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[[Category: Cell adhesion]]
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[[Category: Seiradake E]]
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[[Category: Lrrc4 complex]]
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[[Category: Synapse]]
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Current revision

NetrinG2 in complex with NGL2

PDB ID 3zyi

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