This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1xxb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1xxb" [edit=sysop:move=sysop])
Current revision (08:53, 14 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1xxb.png|left|200px]]
 
-
<!--
+
==C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L-ARGININE COMPLEX==
-
The line below this paragraph, containing "STRUCTURE_1xxb", creates the "Structure Box" on the page.
+
<StructureSection load='1xxb' size='340' side='right'caption='[[1xxb]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1xxb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XXB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XXB FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARG:ARGININE'>ARG</scene></td></tr>
-
{{STRUCTURE_1xxb| PDB=1xxb | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xxb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xxb OCA], [https://pdbe.org/1xxb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xxb RCSB], [https://www.ebi.ac.uk/pdbsum/1xxb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xxb ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ARGR_ECOLI ARGR_ECOLI] Negatively controls the expression of the four operons of arginine biosynthesis in addition to the carAB operon. Predominantly interacts with A/T residues in ARG boxes. It also binds to a specific site in cer locus. Thus it is essential for cer-mediated site-specific recombination in ColE1. It is necessary for monomerization of the plasmid ColE1.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xx/1xxb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xxb ConSurf].
 +
<div style="clear:both"></div>
-
===C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L-ARGININE COMPLEX===
+
==See Also==
-
 
+
*[[Arginine repressor|Arginine repressor]]
-
 
+
*[[Arginine repressor 3D structures|Arginine repressor 3D structures]]
-
<!--
+
__TOC__
-
The line below this paragraph, {{ABSTRACT_PUBMED_8594204}}, adds the Publication Abstract to the page
+
</StructureSection>
-
(as it appears on PubMed at http://www.pubmed.gov), where 8594204 is the PubMed ID number.
+
[[Category: Escherichia coli K-12]]
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_8594204}}
+
[[Category: Ghosh G]]
-
 
+
[[Category: Maas WK]]
-
==About this Structure==
+
[[Category: Sigler PB]]
-
[[1xxb]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli_k12 Escherichia coli k12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XXB OCA].
+
[[Category: Van Duyne GD]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:008594204</ref><references group="xtra"/>
+
-
[[Category: Escherichia coli k12]]
+
-
[[Category: Duyne, G D.Van.]]
+
-
[[Category: Ghosh, G.]]
+
-
[[Category: Maas, W K.]]
+
-
[[Category: Sigler, P B.]]
+

Current revision

C-TERMINAL DOMAIN OF ESCHERICHIA COLI ARGININE REPRESSOR/ L-ARGININE COMPLEX

PDB ID 1xxb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools