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2dch

From Proteopedia

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[[Image:2dch.png|left|200px]]
 
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==Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I==
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The line below this paragraph, containing "STRUCTURE_2dch", creates the "Structure Box" on the page.
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<StructureSection load='2dch' size='340' side='right'caption='[[2dch]], [[Resolution|resolution]] 2.06&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2dch]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoproteus Thermoproteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DCH FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.06&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_2dch| PDB=2dch | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dch FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dch OCA], [https://pdbe.org/2dch PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dch RCSB], [https://www.ebi.ac.uk/pdbsum/2dch PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dch ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8J309_9CREN Q8J309_9CREN]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dc/2dch_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dch ConSurf].
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<div style="clear:both"></div>
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===Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I===
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==See Also==
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*[[Endonuclease 3D structures|Endonuclease 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_17069851}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 17069851 is the PubMed ID number.
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-->
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{{ABSTRACT_PUBMED_17069851}}
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==About this Structure==
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[[2dch]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermoproteus Thermoproteus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DCH OCA].
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==Reference==
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<ref group="xtra">PMID:017069851</ref><references group="xtra"/>
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[[Category: Thermoproteus]]
[[Category: Thermoproteus]]
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[[Category: Miyano, M.]]
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[[Category: Miyano M]]
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[[Category: Nakayama, H.]]
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[[Category: Nakayama H]]
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[[Category: Nomura, N.]]
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[[Category: Nomura N]]
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[[Category: Sako, Y.]]
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[[Category: Sako Y]]
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[[Category: Shimamura, T.]]
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[[Category: Shimamura T]]
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[[Category: Tsuge, H.]]
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[[Category: Tsuge H]]
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[[Category: Alpha/beta fold]]
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[[Category: Hydrolase]]
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Current revision

Crystal structure of archaeal intron-encoded homing endonuclease I-Tsp061I

PDB ID 2dch

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