This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1cno

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1cno" [edit=sysop:move=sysop])
Current revision (15:40, 13 March 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1cno.png|left|200px]]
 
-
<!--
+
==STRUCTURE OF PSEUDOMONAS NAUTICA CYTOCHROME C552, BY MAD METHOD==
-
The line below this paragraph, containing "STRUCTURE_1cno", creates the "Structure Box" on the page.
+
<StructureSection load='1cno' size='340' side='right'caption='[[1cno]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1cno]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Marinobacter_nauticus Marinobacter nauticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CNO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CNO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=HEC:HEME+C'>HEC</scene></td></tr>
-
{{STRUCTURE_1cno| PDB=1cno | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cno OCA], [https://pdbe.org/1cno PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cno RCSB], [https://www.ebi.ac.uk/pdbsum/1cno PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cno ProSAT]</span></td></tr>
-
 
+
</table>
-
===STRUCTURE OF PSEUDOMONAS NAUTICA CYTOCHROME C552, BY MAD METHOD===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CY552_MARNT CY552_MARNT] Electron donor for periplasmic nitrate reductase.
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_10369779}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 10369779 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cn/1cno_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_10369779}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1cno]] is a 8 chain structure of [[Cytochrome c]] with sequence from [http://en.wikipedia.org/wiki/Marinobacter_hydrocarbonoclasticus Marinobacter hydrocarbonoclasticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CNO OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cno ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Cytochrome c]]
+
*[[Cytochrome c nitrite reductase|Cytochrome c nitrite reductase]]
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:010369779</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Marinobacter hydrocarbonoclasticus]]
+
[[Category: Marinobacter nauticus]]
-
[[Category: Brown, K.]]
+
[[Category: Brown K]]
-
[[Category: Cambillau, C.]]
+
[[Category: Cambillau C]]
-
[[Category: Nurizzo, D.]]
+
[[Category: Nurizzo D]]
-
[[Category: Cytochrome c]]
+
-
[[Category: Electron transport]]
+
-
[[Category: Heme]]
+
-
[[Category: Multiwavelength anomalous dispersion]]
+
-
[[Category: Pseudomonas nautica]]
+
-
[[Category: X ray structure]]
+

Current revision

STRUCTURE OF PSEUDOMONAS NAUTICA CYTOCHROME C552, BY MAD METHOD

PDB ID 1cno

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1cno"
Personal tools