1nz6

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1nz6" [edit=sysop:move=sysop])
Current revision (07:06, 30 October 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1nz6.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Auxilin J-Domain==
-
The line below this paragraph, containing "STRUCTURE_1nz6", creates the "Structure Box" on the page.
+
<StructureSection load='1nz6' size='340' side='right'caption='[[1nz6]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1nz6]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NZ6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NZ6 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1nz6| PDB=1nz6 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nz6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nz6 OCA], [https://pdbe.org/1nz6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nz6 RCSB], [https://www.ebi.ac.uk/pdbsum/1nz6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nz6 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/AUXI_BOVIN AUXI_BOVIN] Recruits HSPA8/HSC70 to clathrin-coated vesicles and promotes uncoating of clathrin-coated vesicles.<ref>PMID:15502813</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nz/1nz6_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nz6 ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
J-domains are widespread protein interaction modules involved in recruiting and stimulating the activity of Hsp70 family chaperones. We have determined the crystal structure of the J-domain of auxilin, a protein which is involved in uncoating clathrin-coated vesicles. Comparison to the known structures of J-domains from four other proteins reveals that the auxilin J-domain is the most divergent of all J-domain structures described to date. In addition to the canonical J-domain features described previously, the auxilin J-domain contains an extra N-terminal helix and a long loop inserted between helices I and II. The latter loop extends the positively charged surface which forms the Hsc70 binding site, and is shown by directed mutagenesis and surface plasmon resonance to contain side chains important for binding to Hsc70.
-
===Crystal Structure of Auxilin J-Domain===
+
Structure-function analysis of the auxilin J-domain reveals an extended Hsc70 interaction interface.,Jiang J, Taylor AB, Prasad K, Ishikawa-Brush Y, Hart PJ, Lafer EM, Sousa R Biochemistry. 2003 May 20;42(19):5748-53. PMID:12741832<ref>PMID:12741832</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_12741832}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 1nz6" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 12741832 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_12741832}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
-
[[1nz6]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NZ6 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:012741832</ref><references group="xtra"/>
+
[[Category: Bos taurus]]
[[Category: Bos taurus]]
-
[[Category: Hart, P J.]]
+
[[Category: Large Structures]]
-
[[Category: Ishikawa-Brush, Y.]]
+
[[Category: Hart PJ]]
-
[[Category: Jiang, J.]]
+
[[Category: Ishikawa-Brush Y]]
-
[[Category: Lafer, E M.]]
+
[[Category: Jiang J]]
-
[[Category: Prasad, K.]]
+
[[Category: Lafer EM]]
-
[[Category: Sousa, R.]]
+
[[Category: Prasad K]]
-
[[Category: Taylor, A B.]]
+
[[Category: Sousa R]]
-
[[Category: Alpha helix]]
+
[[Category: Taylor AB]]
-
[[Category: Anti-parallel helix hairpin]]
+
-
[[Category: Protein binding]]
+

Current revision

Crystal Structure of Auxilin J-Domain

PDB ID 1nz6

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools