This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3tu8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:45, 13 July 2022) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 3tu8 is ON HOLD until Paper Publication
+
==Crystal Structure of the Burkholderia Lethal Factor 1 (BLF1)==
 +
<StructureSection load='3tu8' size='340' side='right'caption='[[3tu8]], [[Resolution|resolution]] 1.04&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3tu8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_pseudomallei"_whitmore_1913 "bacillus pseudomallei" whitmore 1913]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TU8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TU8 FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BR:BROMIDE+ION'>BR</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=CSO:S-HYDROXYCYSTEINE'>CSO</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[3tua|3tua]]</div></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">BPSL1549 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=28450 "Bacillus pseudomallei" Whitmore 1913])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3tu8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3tu8 OCA], [https://pdbe.org/3tu8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3tu8 RCSB], [https://www.ebi.ac.uk/pdbsum/3tu8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3tu8 ProSAT]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The structure of BPSL1549, a protein of unknown function from Burkholderia pseudomallei, reveals a similarity to Escherichia coli cytotoxic necrotizing factor 1. We found that BPSL1549 acted as a potent cytotoxin against eukaryotic cells and was lethal when administered to mice. Expression levels of bpsl1549 correlate with conditions expected to promote or suppress pathogenicity. BPSL1549 promotes deamidation of glutamine-339 of the translation initiation factor eIF4A, abolishing its helicase activity and inhibiting translation. We propose to name BPSL1549 Burkholderia lethal factor 1.
-
Authors: Cruz, A., Hautbergue, G.M., Artymiuk, P.J., Baker, P.J., Chang, C.T., Mahadi, N.M., Mobbs, G.W., Mohamed, R., Nathan, S., Partridge, L.J., Raih, M.F., Ruzheinikov, S.N., Sedelnikova, S.E., Wilson, S.A., Rice, D.W.
+
A Burkholderia pseudomallei toxin inhibits helicase activity of translation factor eIF4A.,Cruz-Migoni A, Hautbergue GM, Artymiuk PJ, Baker PJ, Bokori-Brown M, Chang CT, Dickman MJ, Essex-Lopresti A, Harding SV, Mahadi NM, Marshall LE, Mobbs GW, Mohamed R, Nathan S, Ngugi SA, Ong C, Ooi WF, Partridge LJ, Phillips HL, Raih MF, Ruzheinikov S, Sarkar-Tyson M, Sedelnikova SE, Smither SJ, Tan P, Titball RW, Wilson SA, Rice DW Science. 2011 Nov 11;334(6057):821-4. PMID:22076380<ref>PMID:22076380</ref>
-
Description: Crystal Structure of the Burkholderia Lethal Factor 1 (BLF1)
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 3tu8" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Bacillus pseudomallei whitmore 1913]]
 +
[[Category: Large Structures]]
 +
[[Category: Artymiuk, P J]]
 +
[[Category: Baker, P J]]
 +
[[Category: Chang, C T]]
 +
[[Category: Cruz, A]]
 +
[[Category: Hautbergue, G M]]
 +
[[Category: Mahadi, N M]]
 +
[[Category: Mobbs, G W]]
 +
[[Category: Mohamed, R]]
 +
[[Category: Nathan, S]]
 +
[[Category: Partridge, L J]]
 +
[[Category: Raih, M F]]
 +
[[Category: Rice, D W]]
 +
[[Category: Ruzheinikov, S N]]
 +
[[Category: Sedelnikova, S E]]
 +
[[Category: Wilson, S A]]
 +
[[Category: Toxin]]
 +
[[Category: Unknown function]]

Current revision

Crystal Structure of the Burkholderia Lethal Factor 1 (BLF1)

PDB ID 3tu8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools