2bkp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:43, 13 December 2023) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2bkp.gif|left|200px]]<br /><applet load="2bkp" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="2bkp, resolution 2.20&Aring;" />
 
-
'''STRUCTURE ANALYSIS OF UNKNOWN FUNCTION PROTEIN'''<br />
 
-
==About this Structure==
+
==STRUCTURE ANALYSIS OF UNKNOWN FUNCTION PROTEIN==
-
2BKP is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with <scene name='pdbligand=K:'>K</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:K+Binding+Site+For+Chain+A'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BKP OCA].
+
<StructureSection load='2bkp' size='340' side='right'caption='[[2bkp]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
-
[[Category: Pyrococcus horikoshii]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[2bkp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2BKP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2BKP FirstGlance]. <br>
-
[[Category: Inagaki, E.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-
[[Category: Tahirov, T.H.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-
[[Category: K]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2bkp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2bkp OCA], [https://pdbe.org/2bkp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2bkp RCSB], [https://www.ebi.ac.uk/pdbsum/2bkp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2bkp ProSAT], [https://www.topsan.org/Proteins/RSGI/2bkp TOPSAN]</span></td></tr>
-
[[Category: helix rich]]
+
</table>
-
[[Category: hypothetical protein]]
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/O57975_PYRHO O57975_PYRHO]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Feb 3 10:25:12 2008''
+
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/bk/2bkp_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2bkp ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Pyrococcus horikoshii OT3]]
 +
[[Category: Inagaki E]]
 +
[[Category: Tahirov TH]]

Current revision

STRUCTURE ANALYSIS OF UNKNOWN FUNCTION PROTEIN

PDB ID 2bkp

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2bkp"
Personal tools