3ts0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:37, 14 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3ts0.png|left|200px]]
 
-
<!--
+
==Mouse Lin28A in complex with let-7f-1 microRNA pre-element==
-
The line below this paragraph, containing "STRUCTURE_3ts0", creates the "Structure Box" on the page.
+
<StructureSection load='3ts0' size='340' side='right'caption='[[3ts0]], [[Resolution|resolution]] 2.76&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3ts0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TS0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3TS0 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.763&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GMP:GUANOSINE'>GMP</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_3ts0| PDB=3ts0 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ts0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ts0 OCA], [https://pdbe.org/3ts0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ts0 RCSB], [https://www.ebi.ac.uk/pdbsum/3ts0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ts0 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Mouse Lin28A in complex with let-7f-1 microRNA pre-element===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/LN28A_MOUSE LN28A_MOUSE] Acts as a 'translational enhancer', driving specific mRNAs to polysomes and thus increasing the efficiency of protein synthesis. Its association with the translational machinery and target mRNAs results in an increased number of initiation events per molecule of mRNA and, indirectly, in stabilizing the mRNAs. Binds IGF2 mRNA, MYOD1 mRNA, ARBP/36B4 ribosomal protein mRNA and its own mRNA. Essential for skeletal muscle differentiation program through the translational up-regulation of IGF2 expression. Acts as a suppressor of microRNA (miRNA) biogenesis by specifically binding the precursor let-7 (pre-let-7), a miRNA precursor. Acts by binding pre-let-7 and recruiting ZCCHC11/TUT4 uridylyltransferase, leading to the terminal uridylation of pre-let-7. Uridylated pre-let-7 miRNAs fail to be processed by Dicer and undergo degradation. Degradation of pre-let-7 in embryonic stem (ES) cells contributes to the maintenance of ES cells. In contrast, Lin28a down-regulation in neural stem cells by miR-125, allows the processing of pre-let-7. Specifically recognizes the 5'-GGAG-3' motif in the terminal loop of pre-let-7. Also recognizes and binds non pre-let-7 pre-miRNAs that contain the 5'-GGAG-3' motif in the terminal loop, leading to their terminal uridylation and subsequent degradation.<ref>PMID:17473174</ref> <ref>PMID:18604195</ref> <ref>PMID:18566191</ref> <ref>PMID:18292307</ref>
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22078496}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 22078496 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_22078496}}
+
-
 
+
-
==About this Structure==
+
-
[[3ts0]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3TS0 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022078496</ref><references group="xtra"/>
+
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Nam, Y.]]
+
[[Category: Nam Y]]
-
[[Category: Sliz, P.]]
+
[[Category: Sliz P]]
-
[[Category: Cchc zinc knuckle]]
+
-
[[Category: Cold shock domain]]
+
-
[[Category: Microrna biogenesis]]
+
-
[[Category: Pre-element]]
+
-
[[Category: Protein-rna complex]]
+
-
[[Category: Rna binding protein-rna complex]]
+

Current revision

Mouse Lin28A in complex with let-7f-1 microRNA pre-element

PDB ID 3ts0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3ts0"
Personal tools