Anthrax Lethal Factor

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<StructureSection load='1J7N' size='500' side='right' caption='' scene=''>
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<StructureSection load='1j7n' size='340' side='right' scene='' caption='Anthrax toxin lethal factor dimer complex with sulfate and Zn+2 ions (grey) [[1j7n]]'>
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__TOC__
==Introduction==
==Introduction==
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Lethal Factor (LF) is one of the enzymatic components belonging to the [http://en.wikipedia.org/wiki/Anthrax_toxin Anthrax Toxin]. Anthrax toxin is a three protein exotoxin secreted by the bacterium [http://en.wikipedia.org/wiki/Bacillus_anthracis ''Bacillus Anthracis''] made up of a binding protein known as the protective antigen (PA) and two enzyme components known as edema factor (EF) and lethal factor (LF). <ref name=Collier>PMID: 14570563</ref>
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'''Anthrax Lethal Factor''' (LF) is one of the enzymatic components belonging to the [http://en.wikipedia.org/wiki/Anthrax_toxin Anthrax Toxin]. Anthrax toxin is a three component exotoxin secreted by the bacterium [http://en.wikipedia.org/wiki/Bacillus_anthracis ''Bacillus Anthracis''] made up of a binding protein, [[Anthrax protective antigen|protective antigen]] (PA) and two enzyme components [[Anthrax edema factor|edema factor]] (EF) and lethal factor (LF). <ref name=Collier>PMID: 14570563</ref> See also [[Toxins]].
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Anthrax Toxin, encoded by plasmid pXO2, is considered an AB toxin, with two A domains (EF and LF) and one B domain (PA). <ref name=Collier>PMID: 14570563</ref> <ref>Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach</ref> On their own, these three domains are nontoxic, but any combination involving PA with EF and/or LF is what causes the physiological effects. <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref> Initially PA is a 83kDa protein which binds to the host Anthrax toxin Receptor (ATR). Upon binding, PA is cleaved into two fragments by a furin proteases to become a 63 kDa protein bound to the ATR. Cleavage of PA allows self associate to occur which forms a ring shaped heptamer know as the pore precursor (prepore). The prepore is now able to bind up to three molecules of EF and/or LF, leading to endocytosis of the complex. In the endosome, the prepore converts to a transmembrane pore, allowing translocation of EF and LF to the cytosol through a mechanism that is not will understood. EF and LF are now able to carry out their enzymatic activity on the host cell. <ref name=Collier>PMID: 14570563</ref>
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Anthrax Toxin, encoded by plasmid pXO1, is considered an AB toxin, with two A domains (EF and LF) and one B domain (PA). <ref name=Collier>PMID: 14570563</ref> <ref>Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach</ref> On their own, these three domains are nontoxic, but any combination involving PA with EF and/or LF is what causes the physiological effects. <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref> Initially PA is a 83kDa protein which binds to the host Anthrax toxin Receptor (ATR). Upon binding, PA is cleaved into two fragments by furin proteases to become a 63 kDa protein bound to the ATR. Cleavage of PA allows self association to occur which forms a ring shaped heptamer know as the pore precursor (prepore). The prepore is now able to bind up to three molecules of EF and/or LF, leading to endocytosis of the complex. In the endosome, the prepore converts to a transmembrane pore, allowing translocation of EF and LF to the cytosol of target cell through a mechanism that is not well understood. EF and LF are now able to carry out their enzymatic activity on the host cell. <ref name=Collier>PMID: 14570563</ref>
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EF is a calmodulin and calcium dependent adenylate cyclase which causes the edema associated with the disease. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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EF is a calmodulin and calcium dependent adenylate cyclase that increases cAMP to extraordinary levels in cells. Changes in intracellular cAMP affect membrane permeability and may account for edema. In macrophages and neutrophils an additional effect is the depletion of ATP reserves which are needed for the engulfment process. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref>
LF is a Zinc dependent protease that cleaves certain MAP kinase kinases (MAPKK)leading to the disruption of many cellular signalling pathways, which eventually leads to cell death. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
LF is a Zinc dependent protease that cleaves certain MAP kinase kinases (MAPKK)leading to the disruption of many cellular signalling pathways, which eventually leads to cell death. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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PA+LF+EF Leads to lethal activity and edema
PA+LF+EF Leads to lethal activity and edema
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See also [[Anthrax Lethal Factor (hebrew)]].
==Human Interaction==
==Human Interaction==
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Anthrax is primarily a disease of domesticated and wild animals. Herbivores such as cattle, sheep, horses, mules and goats are primarily affected because these animals maybe grazing on soils contaminated with ''Bacillus Anthracis'' endospores. <ref name=Collier>PMID: 14570563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref> The blood of an animal that dies of anthrax can contain upward of 10^9 vegetative bacteria per milliliter and as the carcass decays, the bacteria form highly infectious endospores, which contaminate the local environment and can remain viable for long time periods. <ref name=Collier>PMID: 14570563</ref> The endosopres produced by ''Bacillus Anthracis'' remains viable for lengthy periods do to the poly-D-glutamic acid capsule, which itself is nontoxic. This capsule functions to protect the endospore from complement and other bactericidal components found in serum. This capsule plays an important role during the infection of anthrax, but is not important during the disease phase, which is caused by PA, EF, LF. Genes encoding this plasmid are located on plasmid pXO2. <ref name=Collier>PMID: 14570563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref> Anthrax is not a common disease among humans because it can not be transmittable from human to human. Humans become infected by being exposed to farm animals or contaminated animal products such as wool, hides, flesh and blood. There are three ways in which Anthrax can be transmitted to humans: <ref name=Collier>PMID: 14570563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref>
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Anthrax is primarily a disease of domesticated and wild animals. Herbivores such as cattle, sheep, horses, mules and goats are primarily affected because these animals may be grazing on soils contaminated with ''Bacillus Anthracis'' endospores. <ref name=Collier>PMID: 14570563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref> The blood of an animal that dies of anthrax can contain upward of 10^9 vegetative bacteria per milliliter and as the carcass decays, the bacteria form highly infectious endospores, which contaminate the local environment and can remain viable for long time periods. <ref name=Collier>PMID: 14570563</ref> The endosopres produced by ''Bacillus Anthracis'' remains viable for lengthy periods due to the poly-D-glutamic acid capsule, which itself is nontoxic. This capsule functions to protect the endospore from complement and other bactericidal components found in serum. This capsule plays an important role during the infection of anthrax, but is not important during the disease phase, which is caused by PA, EF, LF. Genes encoding the capsule are located on plasmid pXO1. <ref name=Collier>PMID: 14570563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref> Anthrax is not a common disease among humans because it can not be transmittable from human to human. Humans become infected by being exposed to farm animals or contaminated animal products such as wool, hides, flesh and blood. There are three ways in which Anthrax can be transmitted to humans: <ref name=Collier>PMID: 14570563</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref>
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==Treatments==
==Treatments==
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Antibiotics are used to treat Cutaneous and Inhalation Anthrax infections. The primary antibiotics used are Ciprofloxacin and Doxycycline. Antibiotics should to be administered before symptoms arise, which will likely decrease the fatality rate. In the case of inhalation, treat should be received with 24 hours. If administered after symptoms arise, there is a high rate of fatality. The duration of treatment is 60 days of antibiotics to ensure all spores have germinated. In some cases more than two antibiotics are administered. <ref>CDC. http://www.bt.cdc.gov/agent/anthrax/faq/treatment.asp</ref>.
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Antibiotics are used to treat Cutaneous, if infection spreads and Inhalation Anthrax infections. The primary antibiotics used are [[Ciprofloxacin]] and [[Doxycycline]]. Antibiotics should be administered before symptoms arise, because it will decrease the fatality rate. In the case of inhalation, treatment should be received within 24 hours because the bacteria can rapidly spread. Treatment includes a 60 day course of antibiotics to ensure all spores have germinated. In some cases more than two antibiotics are administered. <ref>CDC. http://www.bt.cdc.gov/agent/anthrax/faq/treatment.asp</ref>.
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Anthrax Lethal Factor is composed of four domains:
Anthrax Lethal Factor is composed of four domains:
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'''<scene name='Anthrax_Lethal_Factor/Domain_-1-/1'>Domain I</scene>''' functions in the binding of Lethal Factor to Protective Antigen 63 (PA63), which is the membrane translocation component of Anthrax Toxin, but the actual location where domain I interacts with PA is unknown. <ref name=Collier>PMID: 14570563</ref> Domain I(residues 1-263) is perched above the other three domains and is connected to the rest of the domains through an abrupt turn at the end of the last helix.<ref name=Collier>PMID: 14570563</ref> Domain I consist of 12-helix bundle, packs against one face of a mixed four-stranded beta-sheet.<ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-1-/1'>Domain I</scene>''' binds Lethal Factor to Protective Antigen 63 (PA63), which is the membrane translocation component of Anthrax Toxin, but the actual location where domain I interacts with PA is unknown. <ref name=Collier>PMID: 14570563</ref> Domain I(residues 1-263) is perched above the other three domains and is connected to the rest of the domains through an abrupt turn at the end of the last helix.<ref name=Collier>PMID: 14570563</ref> Domain I consist of 12-helix bundle, packs against one face of a mixed four-stranded beta-sheet.<ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-3-/1'>Domain III</scene>''' (residues 303-383), contains a segment of five tandem repeats residues 282-382. This suggests that repeats 2-5 arose from a duplication of repeat 1, the second helix-turn element of domain II. Whereas repeats 2-5 form the four helix-turn elements of the helical bundle. This domain is required LF activity, shares the same hydrophobic surface as domain IV and its location restricts access to the active site. Also, it contributes to substrate specificity by making interactions with the substrate. <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-3-/1'>Domain III</scene>''' (residues 303-383), contains a segment of five tandem repeats residues 282-382. This suggests that repeats 2-5 arose from a duplication of repeat 1, which is the second helix-turn element of domain II. Repeats 2-5 form the four helix-turn elements of the helical bundle. This domain is required LF activity, shares the same hydrophobic surface as domain IV and its location restricts access to the active site. Also, it contributes to substrate specificity by making interactions with the substrate. <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-4-/1'>Domain IV</scene>''' (residues 552-776), consists of a nine-helix bundle packed against a four-stranded beta-sheet and contains a HExxH motif. The first six helices and the beta-sheet can be superposed with those of the metalloprotease. A zinc ion is coordinated tetrahedrally by a water molecule and three protein side chains in an arrangement typical of the thermolysin family. Two of the coordinating residues are the histidines from the HExxH motif (His 686 and His 690) and Glu 735. <ref name=Collier>PMID: 14570563</ref><ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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'''<scene name='Anthrax_Lethal_Factor/Domain_-4-/1'>Domain IV</scene>''' (residues 552-776), consists of a nine-helix bundles packed against a four stranded beta-sheet, containing a HExxH motif. The first six helices and the beta-sheet can be superposed with those of the metalloprotease. A zinc ion is coordinated tetrahedrally by a water molecule and three protein side chains in an arrangement typical of the thermolysin family. Two of the coordinating residues are the histidines from the HExxH motif (His 686 and His 690) and Glu 735. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
Domains II, III, and IV for the <scene name='Anthrax_Lethal_Factor/Domain_-spacefill-/2'>binding pocket</scene> for the substrate.
Domains II, III, and IV for the <scene name='Anthrax_Lethal_Factor/Domain_-spacefill-/2'>binding pocket</scene> for the substrate.
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<ref name=Moayeri M, Leppla SH>PMID: 19638283</ref>
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The MAPKK family of proteins are the only known cellular substrates of LF. LF cleaves near their N termini removing the docking sequence for the downstream MAP kinase. At low levels of LF, MAPKK-3 is cleaved inhibiting release of pro-inflammatory mediators. In contrast, high levels of LF lead to lysis of macrophages within a few hours, by an unknown mechanism. This suggests during early infection there is a delayed immune response while in the late stage of infection bacterium in the bloodstream trigger macrophage lysis and the sudden release of high levels pro-inflammatory mediators. This is consistent with the septic shock symptoms seen before death. <ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref>
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<scene name='Anthrax_Lethal_Factor/Domain_4_active_site/2'>Active Site</scene>
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A zinc ion (Zn2+) is coordinated tetrahedrally by a water molecule and three protein side chains, His 686, His 690 and Glu 735. Glu 687 from the HExxH motif lies 3.5A from the water molecule, making it well positioned to act as a general base to activate the zinc-bound water during catalysis. The hydroxyl group of a tyrosine residue (Tyr 728) forms a strong hydrogen bond to the water molecule, on the opposite side of Glu 687, and probably functions as a general acid to protonate the amine leaving group. The binding pocket is not closed at its N-terminal end, so longer tails other MAPKK simply protrude beyond the pocket.<ref name=Collier>PMID: 14570563</ref> <ref name=Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC>PMID: 11700563</ref> <ref name=Moayeri M, Leppla SH>PMID: 19638283</ref>
==Biowarfare==
==Biowarfare==
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[http://en.wikipedia.org/wiki/2001_anthrax_attacks Amerithrax]
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The most will known case of biological warfare in recent times occurred in 2001, known as [http://en.wikipedia.org/wiki/2001_anthrax_attacks Amerithrax]. Anthrax spores are a top choice for biological warfare because their potency. Production of these spores are among the easiest of bioterror agents. <ref>Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach</ref> They can be manipulated and produced in large quantities using basic microbiology techniques. Naturally occurring spores tend to aggregate making them less infection; they can easily be refined and dispersed. Because the anthrax spores are very robust; being able to survive for decades and are difficult to destroy, makes them excellent bioweapons. <ref>Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach</ref> <ref>Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html</ref>
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== 3D structures of anthrax lethal factor==
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[[Anthrax lethal factor 3D structures]]
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</StructureSection>
==References==
==References==
{{Reflist}}
{{Reflist}}
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</StructureSection>
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[[Category:Topic Page]]

Current revision

Anthrax toxin lethal factor dimer complex with sulfate and Zn+2 ions (grey) 1j7n

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References

  1. 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 Collier RJ, Young JA. Anthrax toxin. Annu Rev Cell Dev Biol. 2003;19:45-70. PMID:14570563 doi:10.1146/annurev.cellbio.19.111301.140655
  2. Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach
  3. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  4. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  5. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  6. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  7. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  8. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  9. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  10. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  11. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  12. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  13. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html
  14. CDC. http://www.bt.cdc.gov/agent/anthrax/faq/treatment.asp
  15. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  16. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  17. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  18. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  19. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  20. Pannifer AD, Wong TY, Schwarzenbacher R, Renatus M, Petosa C, Bienkowska J, Lacy DB, Collier RJ, Park S, Leppla SH, Hanna P, Liddington RC. Crystal structure of the anthrax lethal factor. Nature. 2001 Nov 8;414(6860):229-33. PMID:11700563 doi:10.1038/n35101998
  21. Moayeri M, Leppla SH. Cellular and systemic effects of anthrax lethal toxin and edema toxin. Mol Aspects Med. 2009 Dec;30(6):439-55. Epub 2009 Jul 26. PMID:19638283 doi:10.1016/j.mam.2009.07.003
  22. Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach
  23. Brenda A. Wilson, Abigail A. Salyers, Dixie D. Whitt, and Malcolm E. Winkler. Third Edition. Bacterial Pathogenesis A Molecular Approach
  24. Kenneth Todar, PhD. (2008). http://textbookofbacteriology.net/Anthrax_3.html

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