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3hmq

From Proteopedia

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[[Image:3hmq.png|left|200px]]
 
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==1.9 Angstrom resolution crystal structure of a NAD synthetase (nadE) from Salmonella typhimurium LT2 in complex with NAD(+)==
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The line below this paragraph, containing "STRUCTURE_3hmq", creates the "Structure Box" on the page.
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<StructureSection load='3hmq' size='340' side='right'caption='[[3hmq]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3hmq]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_typhimurium"_loeffler_1892 "bacillus typhimurium" loeffler 1892]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HMQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HMQ FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAD:NICOTINAMIDE-ADENINE-DINUCLEOTIDE'>NAD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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{{STRUCTURE_3hmq| PDB=3hmq | SCENE= }}
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nadE, STM1310 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 "Bacillus typhimurium" Loeffler 1892])</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/NAD(+)_synthase NAD(+) synthase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.1.5 6.3.1.5] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hmq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hmq OCA], [https://pdbe.org/3hmq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hmq RCSB], [https://www.ebi.ac.uk/pdbsum/3hmq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hmq ProSAT], [https://www.topsan.org/Proteins/CSGID/3hmq TOPSAN]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/3hmq_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hmq ConSurf].
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<div style="clear:both"></div>
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===1.9 Angstrom resolution crystal structure of a NAD synthetase (nadE) from Salmonella typhimurium LT2 in complex with NAD(+)===
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==See Also==
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*[[NAD synthase|NAD synthase]]
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__TOC__
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==About this Structure==
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</StructureSection>
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[[3hmq]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HMQ OCA].
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[[Category: Bacillus typhimurium loeffler 1892]]
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[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
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[[Category: Large Structures]]
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[[Category: Anderson, W F.]]
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[[Category: Anderson, W F]]
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[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
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[[Category: Structural genomic]]
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[[Category: Halavaty, A S.]]
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[[Category: Halavaty, A S]]
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[[Category: Onopriyenko, O.]]
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[[Category: Onopriyenko, O]]
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[[Category: Peterson, S N.]]
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[[Category: Peterson, S N]]
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[[Category: Savchenko, A.]]
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[[Category: Savchenko, A]]
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[[Category: Skarina, T.]]
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[[Category: Skarina, T]]
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[[Category: Wawrzak, Z.]]
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[[Category: Wawrzak, Z]]
[[Category: Atp-binding]]
[[Category: Atp-binding]]
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[[Category: Center for structural genomics of infectious disease]]
 
[[Category: Csgid]]
[[Category: Csgid]]
[[Category: Infectious disease]]
[[Category: Infectious disease]]
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[[Category: Nad]]
[[Category: Nad]]
[[Category: Nucleotide-binding]]
[[Category: Nucleotide-binding]]
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[[Category: Structural genomic]]
 

Current revision

1.9 Angstrom resolution crystal structure of a NAD synthetase (nadE) from Salmonella typhimurium LT2 in complex with NAD(+)

PDB ID 3hmq

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