This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2lm9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 2lm9 is ON HOLD Authors: Tan, K., Mok, Y. Description: The NMR structure of a major allergen from dust mite)
Current revision (05:46, 15 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 2lm9 is ON HOLD
+
==The NMR structure of a major allergen from dust mite==
 +
<StructureSection load='2lm9' size='340' side='right'caption='[[2lm9]]' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[2lm9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Blomia_tropicalis Blomia tropicalis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LM9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LM9 FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lm9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lm9 OCA], [https://pdbe.org/2lm9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lm9 RCSB], [https://www.ebi.ac.uk/pdbsum/2lm9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lm9 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/ALL21_BLOTA ALL21_BLOTA]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Blo t 21 is a paralogue of the group 5 allergen, Blo t 5, a major allergen from the dust mite Blomia tropicalis. Blo t 21 has moderate sequence identity (40.7%) to Blo t 5 and low-to-moderate cross-reactivity to Blo t 5. In B. tropicalis, the most prevalent and allergenic allergens are in the order of Blo t 21, Blo t 5 and Blo t 7. Here, we determined the NMR solution structure of Blo t 21 which represents the first structure of the group 21 dust mite allergen. The structure of Blo t 21 closely resembles the structures of Blo t 5 and Der p 5, comprising three anti-parallel alpha-helices arranged in a helical bundle. Using site-directed mutagenesis and specific IgE binding ELISA, Blo t 21 was found to contain both conserved and unique charged IgE eptope residues at the L2 loop region and on helix alpha3. Cross-inhibition assays confirmed that Blo t 21 has a low-to-moderate cross-reactivity with Blo t 5 and Der p 5 and represents a novel group of major allergen in B. tropicalis. In addition to group 5 allergens, Blo t 21 has also a low-to-moderate cross-reactivity with group 21 allergens from Dermatophagoides mites, confirming that B. tropicalis is a major and distinct source of dust mite allergens.
-
Authors: Tan, K., Mok, Y.
+
NMR structure and IgE epitopes of Blo t 21, a major dust mite allergen from Blomia tropicalis.,Tan KW, Ong TC, Gao YF, Tiong YS, Wong KN, Chew FT, Mok YK J Biol Chem. 2012 Aug 10. PMID:22887997<ref>PMID:22887997</ref>
-
Description: The NMR structure of a major allergen from dust mite
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 2lm9" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Blomia tropicalis]]
 +
[[Category: Large Structures]]
 +
[[Category: Mok YK]]
 +
[[Category: Tan KW]]

Current revision

The NMR structure of a major allergen from dust mite

PDB ID 2lm9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools