1m06

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[[Image:1m06.png|left|200px]]
 
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==Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography==
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The line below this paragraph, containing "STRUCTURE_1m06", creates the "Structure Box" on the page.
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<StructureSection load='1m06' size='340' side='right'caption='[[1m06]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1m06]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_alpha3 Escherichia phage alpha3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M06 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1M06 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=3DR:1,2-DIDEOXYRIBOFURANOSE-5-PHOSPHATE'>3DR</scene></td></tr>
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{{STRUCTURE_1m06| PDB=1m06 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1m06 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1m06 OCA], [https://pdbe.org/1m06 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1m06 RCSB], [https://www.ebi.ac.uk/pdbsum/1m06 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1m06 ProSAT]</span></td></tr>
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</table>
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===Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography===
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== Function ==
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[https://www.uniprot.org/uniprot/CAPSD_BPAL3 CAPSD_BPAL3] Assembles to form an icosahedral capsid with a T=1 symmetry, about 30 nm in diameter, and consisting of 60 capsid proteins F. Upon virus binding to host cell, one of the spikes dissociates from the capsid and the virus interacts with LPS through the exposed EF loops on the F proteins. After the genome had been ejected, the channel formed by the F proteins at the unique fivefold axis remains open.[UniProtKB:P03641]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_12473449}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 12473449 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/m0/1m06_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_12473449}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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[[1m06]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_alpha3 Enterobacteria phage alpha3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1M06 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1m06 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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<ref group="xtra">PMID:012473449</ref><references group="xtra"/>
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</StructureSection>
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[[Category: Enterobacteria phage alpha3]]
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[[Category: Escherichia phage alpha3]]
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[[Category: Baker, T S.]]
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[[Category: Large Structures]]
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[[Category: Bernal, R A.]]
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[[Category: Baker TS]]
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[[Category: Bowman, V.]]
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[[Category: Bernal RA]]
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[[Category: Chipman, P R.]]
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[[Category: Bowman V]]
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[[Category: Fane, B A.]]
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[[Category: Chipman PR]]
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[[Category: Hafenstein, S.]]
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[[Category: Fane BA]]
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[[Category: Olson, N H.]]
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[[Category: Hafenstein S]]
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[[Category: Rossmann, M G.]]
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[[Category: Olson NH]]
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[[Category: Assembly]]
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[[Category: Rossmann MG]]
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[[Category: Bacteriophage]]
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[[Category: Icosahedral virus]]
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[[Category: Microviridae]]
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[[Category: Morphogenesis]]
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[[Category: Phix174]]
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[[Category: Three-dimensional structure]]
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[[Category: Virion]]
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[[Category: Virus-dna complex]]
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Current revision

Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography

PDB ID 1m06

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