2l5m

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[[Image:2l5m.png|left|200px]]
 
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==Solution structure of GF-17 in complex with micelles==
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The line below this paragraph, containing "STRUCTURE_2l5m", creates the "Structure Box" on the page.
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<StructureSection load='2l5m' size='340' side='right'caption='[[2l5m]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2l5m]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L5M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L5M FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NH2:AMINO+GROUP'>NH2</scene></td></tr>
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{{STRUCTURE_2l5m| PDB=2l5m | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l5m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l5m OCA], [https://pdbe.org/2l5m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l5m RCSB], [https://www.ebi.ac.uk/pdbsum/2l5m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l5m ProSAT]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Human cathelicidin LL-37 is a critical cationic antimicrobial peptide for host defense against infection, immune modulation, and wound healing. This article elucidates the functional roles of the cationic side chains of the major antimicrobial region of LL-37, corresponding to residues 17-32 (designated GF-17). Antimicrobial assays, killing kinetics studies, and vesicle leakage experiments all indicate that a conversion of lysines to arginines affected the ability of the peptide to kill the Gram-positive Staphylococcus aureus USA300 strain. Alanine scanning experiments show that S. aureus is less sensitive to the single cationic residue mutation of GF-17, whereas Escherichia coli is more susceptible. Among the five cationic residues, R23 appears to be somewhat important in killing S. aureus. However, R23 and K25 of GF-17 are of prime importance in killing Gram-negative E. coli. In particular, R23 is essential for (1) rapid recognition; (2) permeation of the E. coli outer membrane; (3) clustering of anionic lipids in a membrane system mimicking the E. coli inner membrane; and (4) membrane disruption. Bacterial aggregation (i.e. rapid recognition via charge neutralization) is the first step of the peptide action. Structurally, R23 is located in the interface (i.e. the first action layer) ideal for the above interactions. In contrast, residues K18, R19, and R29 are on the hydrophilic surface of the amphipathic helix and only play a secondary role. Mapping the functional spectrum of cationic residues of GF-17 provides a solid basis for engineering bacteria-specific antimicrobials using this highly potent template.
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===Solution structure of GF-17 in complex with micelles===
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Decoding the Functional Roles of Cationic Side Chains of the Major Antimicrobial Region of Human Cathelicidin LL-37.,Wang G, Epand RF, Mishra B, Lushnikova T, Thomas VC, Bayles KW, Epand RM Antimicrob Agents Chemother. 2011 Nov 14. PMID:22083479<ref>PMID:22083479</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_22083479}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2l5m" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 22083479 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_22083479}}
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__TOC__
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</StructureSection>
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==About this Structure==
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[[Category: Large Structures]]
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[[2l5m]] is a 1 chain structure. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L5M OCA].
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[[Category: Synthetic construct]]
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[[Category: Wang G]]
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==Reference==
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<ref group="xtra">PMID:022083479</ref><references group="xtra"/>
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[[Category: Wang, G.]]
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[[Category: Antimicrobial peptide]]
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[[Category: Antimicrobial protein]]
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[[Category: Ll-37-derived]]
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Current revision

Solution structure of GF-17 in complex with micelles

PDB ID 2l5m

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