3ukg

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[[Image:3ukg.png|left|200px]]
 
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==Crystal structure of Rap1/DNA complex==
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The line below this paragraph, containing "STRUCTURE_3ukg", creates the "Structure Box" on the page.
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<StructureSection load='3ukg' size='340' side='right'caption='[[3ukg]], [[Resolution|resolution]] 2.95&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3ukg]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae_S288C Saccharomyces cerevisiae S288C]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UKG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3UKG FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.95&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
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{{STRUCTURE_3ukg| PDB=3ukg | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ukg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ukg OCA], [https://pdbe.org/3ukg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ukg RCSB], [https://www.ebi.ac.uk/pdbsum/3ukg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ukg ProSAT]</span></td></tr>
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</table>
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===Crystal structure of Rap1/DNA complex===
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== Function ==
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[https://www.uniprot.org/uniprot/RAP1_YEAST RAP1_YEAST] Essential regulatory protein in yeast whose DNA-binding sites are found at three types of chromosomal elements: promoters, silencers, and telomeres. RAP1 is also involved in the regulation of telomere structure, where its binding sites are found within the terminal poly[C(1-3)A] sequences. The opposite regulatory functions of RAP1 are not intrinsic to its binding sites but, instead, result from interactions with different factors at promoters and silencers. RAP1 associates with SIR3 and SIR4 proteins to form a DNA-binding complex that initiates the repression at the HM loci and telomeres. May also target the binding of RIF1 and RIF2 to silencers and telomeres. Forms with GCR1 a transcriptional activation complex that is required for expression of glycolytic and ribosomal gene.
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_22139930}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 22139930 is the PubMed ID number.
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[[Category: Saccharomyces cerevisiae S288C]]
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[[Category: Gasparini S]]
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{{ABSTRACT_PUBMED_22139930}}
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[[Category: Le Bihan Y-V]]
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[[Category: LeDu MH]]
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==About this Structure==
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[[Category: Matot B]]
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[[3ukg]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UKG OCA].
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==Reference==
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<ref group="xtra">PMID:022139930</ref><references group="xtra"/>
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Bihan, Y V.Le.]]
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[[Category: Gasparini, S.]]
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[[Category: LeDu, M H.]]
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[[Category: Matot, B.]]
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[[Category: Dna binding protein-dna complex]]
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[[Category: Double myb]]
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[[Category: Nucleus]]
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[[Category: Telomeres length regulation]]
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[[Category: Telomeres protection]]
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[[Category: Transcription regulation]]
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Current revision

Crystal structure of Rap1/DNA complex

PDB ID 3ukg

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