|
|
| (6 intermediate revisions not shown.) |
| Line 1: |
Line 1: |
| - | [[Image:2lai.jpg|left|200px]] | |
| | | | |
| - | <!-- | + | ==Hyaloperonospora arabidopsidis Effector Protein ATR13== |
| - | The line below this paragraph, containing "STRUCTURE_2lai", creates the "Structure Box" on the page.
| + | <StructureSection load='2lai' size='340' side='right'caption='[[2lai]]' scene=''> |
| - | You may change the PDB parameter (which sets the PDB file loaded into the applet)
| + | == Structural highlights == |
| - | or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
| + | <table><tr><td colspan='2'>[[2lai]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Hyaloperonospora_parasitica Hyaloperonospora parasitica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LAI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LAI FirstGlance]. <br> |
| - | or leave the SCENE parameter empty for the default display.
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | --> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lai FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lai OCA], [https://pdbe.org/2lai PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lai RCSB], [https://www.ebi.ac.uk/pdbsum/2lai PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lai ProSAT]</span></td></tr> |
| - | {{STRUCTURE_2lai| PDB=2lai | SCENE= }}
| + | </table> |
| | + | == Function == |
| | + | [https://www.uniprot.org/uniprot/ATR13_HYAAB ATR13_HYAAB] Secreted effector that acts as an elicitor of hypersensitive response (HR) specifically on plants carrying defense protein RPP13. Recognition of ATR13 by RPP13 initiates defense responses that are effective against oomycete, bacterial and viral pathogens (PubMed:15591208, PubMed:18165328, PubMed:18198274, PubMed:22194907). The allele ATR13-Emco5 recognizes RPP13-Nd, the RPP13 defense protein from Arabidopsis thaliana ecotype Niederzenz (PubMed:19523099).<ref>PMID:15591208</ref> <ref>PMID:18165328</ref> <ref>PMID:18198274</ref> <ref>PMID:19523099</ref> <ref>PMID:22194907</ref> |
| | | | |
| - | ===Hyaloperonospora arabidopsidis Effector Protein ATR13=== | + | ==See Also== |
| - | | + | *[[Avirulence protein 3D structures|Avirulence protein 3D structures]] |
| - | | + | == References == |
| - | <!--
| + | <references/> |
| - | The line below this paragraph, {{ABSTRACT_PUBMED_22194684}}, adds the Publication Abstract to the page
| + | __TOC__ |
| - | (as it appears on PubMed at http://www.pubmed.gov), where 22194684 is the PubMed ID number.
| + | </StructureSection> |
| - | -->
| + | |
| - | {{ABSTRACT_PUBMED_22194684}}
| + | |
| - | | + | |
| - | ==About this Structure==
| + | |
| - | [[2lai]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Hyaloperonospora_parasitica Hyaloperonospora parasitica]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LAI OCA]. | + | |
| - | | + | |
| - | ==Reference== | + | |
| - | <ref group="xtra">PMID:022194684</ref><references group="xtra"/> | + | |
| | [[Category: Hyaloperonospora parasitica]] | | [[Category: Hyaloperonospora parasitica]] |
| - | [[Category: Leonelli, L.]] | + | [[Category: Large Structures]] |
| - | [[Category: Pelton, J G.]] | + | [[Category: Leonelli L]] |
| - | [[Category: Staskawicz, B J.]] | + | [[Category: Pelton JG]] |
| - | [[Category: Wemmer, D E.]] | + | [[Category: Staskawicz BJ]] |
| - | [[Category: Nucleolar localization]] | + | [[Category: Wemmer DE]] |
| - | [[Category: Signaling protein]]
| + | |
| Structural highlights
Function
ATR13_HYAAB Secreted effector that acts as an elicitor of hypersensitive response (HR) specifically on plants carrying defense protein RPP13. Recognition of ATR13 by RPP13 initiates defense responses that are effective against oomycete, bacterial and viral pathogens (PubMed:15591208, PubMed:18165328, PubMed:18198274, PubMed:22194907). The allele ATR13-Emco5 recognizes RPP13-Nd, the RPP13 defense protein from Arabidopsis thaliana ecotype Niederzenz (PubMed:19523099).[1] [2] [3] [4] [5]
See Also
References
- ↑ Allen RL, Bittner-Eddy PD, Grenville-Briggs LJ, Meitz JC, Rehmany AP, Rose LE, Beynon JL. Host-parasite coevolutionary conflict between Arabidopsis and downy mildew. Science. 2004 Dec 10;306(5703):1957-60. PMID:15591208 doi:http://dx.doi.org/306/5703/1957
- ↑ Sohn KH, Lei R, Nemri A, Jones JD. The downy mildew effector proteins ATR1 and ATR13 promote disease susceptibility in Arabidopsis thaliana. Plant Cell. 2007 Dec;19(12):4077-90. doi: 10.1105/tpc.107.054262. Epub 2007 Dec , 28. PMID:18165328 doi:http://dx.doi.org/10.1105/tpc.107.054262
- ↑ Rentel MC, Leonelli L, Dahlbeck D, Zhao B, Staskawicz BJ. Recognition of the Hyaloperonospora parasitica effector ATR13 triggers resistance against oomycete, bacterial, and viral pathogens. Proc Natl Acad Sci U S A. 2008 Jan 22;105(3):1091-6. doi: , 10.1073/pnas.0711215105. Epub 2008 Jan 15. PMID:18198274 doi:http://dx.doi.org/10.1073/pnas.0711215105
- ↑ Hall SA, Allen RL, Baumber RE, Baxter LA, Fisher K, Bittner-Eddy PD, Rose LE, Holub EB, Beynon JL. Maintenance of genetic variation in plants and pathogens involves complex networks of gene-for-gene interactions. Mol Plant Pathol. 2009 Jul;10(4):449-57. doi: 10.1111/j.1364-3703.2009.00544.x. PMID:19523099 doi:http://dx.doi.org/10.1111/j.1364-3703.2009.00544.x
- ↑ Krasileva KV, Zheng C, Leonelli L, Goritschnig S, Dahlbeck D, Staskawicz BJ. Global analysis of Arabidopsis/downy mildew interactions reveals prevalence of incomplete resistance and rapid evolution of pathogen recognition. PLoS One. 2011;6(12):e28765. doi: 10.1371/journal.pone.0028765. Epub 2011 Dec 14. PMID:22194907 doi:http://dx.doi.org/10.1371/journal.pone.0028765
|