3v6b

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[[Image:3v6b.jpg|left|200px]]
 
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==VEGFR-2/VEGF-E complex structure==
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The line below this paragraph, containing "STRUCTURE_3v6b", creates the "Structure Box" on the page.
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<StructureSection load='3v6b' size='340' side='right'caption='[[3v6b]], [[Resolution|resolution]] 3.21&Aring;' scene=''>
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[3v6b]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [https://en.wikipedia.org/wiki/Orf_virus Orf virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V6B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3V6B FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.205&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3v6b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v6b OCA], [https://pdbe.org/3v6b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3v6b RCSB], [https://www.ebi.ac.uk/pdbsum/3v6b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3v6b ProSAT]</span></td></tr>
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{{STRUCTURE_3v6b| PDB=3v6b | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/VEGFH_ORFN2 VEGFH_ORFN2] Induces endothelial proliferation.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Vascular Endothelial Growth Factors (VEGFs) activate three receptor tyrosine kinases, VEGFR-1-3, promoting angiogenic and lymphangiogenic signaling. The extracellular receptor domain (ECD) consists of seven immunoglobulin-homology domains; domains 2 and 3 (D23) represent the ligand binding domain, while the function of D4-7 is unclear. Ligand binding promotes receptor dimerization and instigates transmembrane signaling and receptor kinase activation. Isothermal titration calorimetry showed that the Gibbs free energy of VEGF-A, -C or -E binding to D23 or the full length ECD is dominated by favorable entropic contribution with enthalpic penalty. The free energy of VEGF binding to the ECD is 1.0-1.7 kcal/mol less favorable than for binding to D23. A model of the VEGF-E/VEGFR-2 ECD complex derived from small angle scattering data provided evidence for homotypic interactions in D4-7. We also solved the crystal structures of complexes between VEGF-A or -E with D23 which revealed comparable binding surfaces and similar interactions between the ligands and the receptor, but showed variation in D23 twist angles. The energetically unfavorable homotypic interactions in D4-7 may be required for re-orientation of receptor monomers. This mechanism might prevent ligand-independent activation of VEGFR-2 to evade the deleterious consequences for blood and lymph vessel homeostasis arising from inappropriate receptor activation.
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===VEGFR-2/VEGF-E complex structure===
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Thermodynamic and structural description of allosterically regulated VEGF receptor 2 dimerization.,Brozzo MS, Bjelic S, Kisko K, Schleier T, Leppanen VM, Alitalo K, Winkler FK, Ballmer-Hofer K Blood. 2011 Dec 29. PMID:22207738<ref>PMID:22207738</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 3v6b" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_22207738}}, adds the Publication Abstract to the page
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*[[VEGF 3D Structures|VEGF 3D Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 22207738 is the PubMed ID number.
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*[[3D structures of vascular endothelial growth factor receptor|3D structures of vascular endothelial growth factor receptor]]
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== References ==
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{{ABSTRACT_PUBMED_22207738}}
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<references/>
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__TOC__
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==About this Structure==
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</StructureSection>
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[[3v6b]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Orf_virus Orf virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V6B OCA].
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==Reference==
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<ref group="xtra">PMID:022207738</ref><references group="xtra"/>
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Large Structures]]
[[Category: Orf virus]]
[[Category: Orf virus]]
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[[Category: Receptor protein-tyrosine kinase]]
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[[Category: Ballmer-Hofer K]]
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[[Category: Ballmer-Hofer,K.]]
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[[Category: Brozzo MS]]
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[[Category: Brozzo, M S.]]
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[[Category: Kisko K]]
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[[Category: Kisko, K.]]
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[[Category: Leppanen V-M]]
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[[Category: Leppanen, V M.]]
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[[Category: Winkler FK]]
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[[Category: Winkler, F K.]]
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[[Category: Angiogenesis]]
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[[Category: Growth factor receptor]]
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[[Category: Hormone-signaling protein complex]]
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[[Category: Ig-homology domain]]
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[[Category: Membrane]]
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[[Category: Orf virus]]
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[[Category: Vegf ligand]]
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[[Category: Vegf-e]]
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[[Category: Vegfr-2]]
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Current revision

VEGFR-2/VEGF-E complex structure

PDB ID 3v6b

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