2pmk
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2pmk" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pmk" /> ''''''<br /> ==About this Structure== is a [h...) |
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| - | [[Image:2pmk.jpg|left|200px]]<br /><applet load="2pmk" size="350" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="2pmk" /> | ||
| - | ''''''<br /> | ||
| - | == | + | ==Crystal structures of an isolated ABC-ATPase in complex with TNP-ADP== |
| - | + | <StructureSection load='2pmk' size='340' side='right'caption='[[2pmk]], [[Resolution|resolution]] 1.60Å' scene=''> | |
| - | [[ | + | == Structural highlights == |
| + | <table><tr><td colspan='2'>[[2pmk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PMK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PMK FirstGlance]. <br> | ||
| + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6Å</td></tr> | ||
| + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=128:SPIRO(2,4,6-TRINITROBENZENE[1,2A]-2O,3O-METHYLENE-ADENINE-TRIPHOSPHATE'>128</scene>, <scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pmk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pmk OCA], [https://pdbe.org/2pmk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pmk RCSB], [https://www.ebi.ac.uk/pdbsum/2pmk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pmk ProSAT]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/HLYBP_ECOLX HLYBP_ECOLX] Part of the ABC transporter complex HlyBD involved in hemolysin export. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pm/2pmk_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pmk ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[ABC transporter 3D structures|ABC transporter 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Escherichia coli]] | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Holland IB]] | ||
| + | [[Category: Jenewein S]] | ||
| + | [[Category: Oswald C]] | ||
| + | [[Category: Schmitt L]] | ||
Current revision
Crystal structures of an isolated ABC-ATPase in complex with TNP-ADP
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