4a13

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[[Image:4a13.jpg|left|200px]]
 
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==model refined against symmetry-free cryo-EM map of TRiC-ADP==
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The line below this paragraph, containing "STRUCTURE_4a13", creates the "Structure Box" on the page.
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<SX load='4a13' size='340' side='right' viewer='molstar' caption='[[4a13]], [[Resolution|resolution]] 11.30&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[4a13]] is a 16 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A13 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4A13 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 11.3&#8491;</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4a13 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4a13 OCA], [https://pdbe.org/4a13 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4a13 RCSB], [https://www.ebi.ac.uk/pdbsum/4a13 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4a13 ProSAT]</span></td></tr>
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{{STRUCTURE_4a13| PDB=4a13 | SCENE= }}
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TCPB_BOVIN TCPB_BOVIN] Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. As part of the BBS/CCT complex may play a role in the assembly of BBSome, a complex involved in ciliogenesis regulating transports vesicles to the cilia. Known to play a role, in vitro, in the folding of actin and tubulin (By similarity).
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The eukaryotic group II chaperonin TRiC/CCT is a 16-subunit complex with eight distinct but similar subunits arranged in two stacked rings. Substrate folding inside the central chamber is triggered by ATP hydrolysis. We present five cryo-EM structures of TRiC in apo and nucleotide-induced states without imposing symmetry during the 3D reconstruction. These structures reveal the intra- and inter-ring subunit interaction pattern changes during the ATPase cycle. In the apo state, the subunit arrangement in each ring is highly asymmetric, whereas all nucleotide-containing states tend to be more symmetrical. We identify and structurally characterize an one-ring closed intermediate induced by ATP hydrolysis wherein the closed TRiC ring exhibits an observable chamber expansion. This likely represents the physiological substrate folding state. Our structural results suggest mechanisms for inter-ring-negative cooperativity, intra-ring-positive cooperativity, and protein-folding chamber closure of TRiC. Intriguingly, these mechanisms are different from other group I and II chaperonins despite their similar architecture.
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===model refined agains symmetry-free cryo-EM map of TRiC-ADP===
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Symmetry-free cryo-EM structures of the chaperonin TRiC along its ATPase-driven conformational cycle.,Cong Y, Schroder GF, Meyer AS, Jakana J, Ma B, Dougherty MT, Schmid MF, Reissmann S, Levitt M, Ludtke SL, Frydman J, Chiu W EMBO J. 2011 Nov 1;31(3):720-30. doi: 10.1038/emboj.2011.366. PMID:22045336<ref>PMID:22045336</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4a13" style="background-color:#fffaf0;"></div>
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==See Also==
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The line below this paragraph, {{ABSTRACT_PUBMED_22045336}}, adds the Publication Abstract to the page
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*[[Chaperonin 3D structures|Chaperonin 3D structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 22045336 is the PubMed ID number.
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== References ==
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<references/>
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{{ABSTRACT_PUBMED_22045336}}
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__TOC__
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</SX>
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==About this Structure==
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[[4a13]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4A13 OCA].
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==Reference==
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<ref group="xtra">PMID:022045336</ref><references group="xtra"/>
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[[Category: Bos taurus]]
[[Category: Bos taurus]]
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[[Category: Chiu, W.]]
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[[Category: Large Structures]]
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[[Category: Cong, Y.]]
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[[Category: Chiu W]]
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[[Category: Dougherty, M T.]]
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[[Category: Cong Y]]
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[[Category: Frydman, J.]]
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[[Category: Dougherty MT]]
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[[Category: Jakana, J.]]
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[[Category: Frydman J]]
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[[Category: Levitt, M.]]
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[[Category: Jakana J]]
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[[Category: Ludtke, S L.]]
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[[Category: Levitt M]]
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[[Category: Ma, B.]]
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[[Category: Ludtke SL]]
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[[Category: Meyer, A S.]]
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[[Category: Ma B]]
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[[Category: Reissmann, S.]]
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[[Category: Meyer AS]]
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[[Category: Schmid, M F.]]
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[[Category: Reissmann S]]
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[[Category: Schroder, G F.]]
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[[Category: Schmid MF]]
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[[Category: Chaperone]]
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[[Category: Schroder GF]]
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[[Category: Chaperonin]]
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[[Category: Protein folding]]
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Current revision

model refined against symmetry-free cryo-EM map of TRiC-ADP

4a13, resolution 11.30Å

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