2l3u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:52, 1 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2l3u.png|left|200px]]
 
-
<!--
+
==Solution Structure of Domain IV from the YbbR family protein of Desulfitobacterium hafniense: Northeast Structural Genomics Consortium target DhR29A==
-
The line below this paragraph, containing "STRUCTURE_2l3u", creates the "Structure Box" on the page.
+
<StructureSection load='2l3u' size='340' side='right'caption='[[2l3u]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2l3u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfitobacterium_hafniense_DCB-2 Desulfitobacterium hafniense DCB-2]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2kps 2kps]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L3U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L3U FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l3u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l3u OCA], [https://pdbe.org/2l3u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l3u RCSB], [https://www.ebi.ac.uk/pdbsum/2l3u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l3u ProSAT]</span></td></tr>
-
{{STRUCTURE_2l3u| PDB=2l3u | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution Structure of Domain IV from the YbbR family protein of Desulfitobacterium hafniense: Northeast Structural Genomics Consortium target DhR29A===
+
[https://www.uniprot.org/uniprot/B8FX10_DESHD B8FX10_DESHD]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_21154411}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 21154411 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l3/2l3u_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_21154411}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2l3u ConSurf].
-
[[2l3u]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfitobacterium_hafniense Desulfitobacterium hafniense]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2kps 2kps]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L3U OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:021154411</ref><references group="xtra"/>
+
[[Category: Desulfitobacterium hafniense DCB-2]]
-
[[Category: Desulfitobacterium hafniense]]
+
[[Category: Large Structures]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton TB]]
-
[[Category: Barb, A W.]]
+
[[Category: Barb AW]]
-
[[Category: Belote, R L.]]
+
[[Category: Belote RL]]
-
[[Category: Ciccosanti, C.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Everett, J K.]]
+
[[Category: Everett JK]]
-
[[Category: Hamilton, K.]]
+
[[Category: Hamilton K]]
-
[[Category: Lee, H.]]
+
[[Category: Lee H]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Prestegard JH]]
-
[[Category: Prestegard, J H.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R.]]
+
-
[[Category: Beta strand]]
+
-
[[Category: Figure 8]]
+
-
[[Category: Figure eight]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-biology]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Solution Structure of Domain IV from the YbbR family protein of Desulfitobacterium hafniense: Northeast Structural Genomics Consortium target DhR29A

PDB ID 2l3u

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools