3osj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3osj" [edit=sysop:move=sysop])
Current revision (06:36, 27 November 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3osj.png|left|200px]]
 
-
<!--
+
==X-Ray Structure of Phycobilisome LCM core-membrane linker polypeptide (fragment 254-400) from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR209C==
-
The line below this paragraph, containing "STRUCTURE_3osj", creates the "Structure Box" on the page.
+
<StructureSection load='3osj' size='340' side='right'caption='[[3osj]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3osj]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechocystis_sp._PCC_6803 Synechocystis sp. PCC 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OSJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3OSJ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=NO3:NITRATE+ION'>NO3</scene></td></tr>
-
{{STRUCTURE_3osj| PDB=3osj | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3osj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3osj OCA], [https://pdbe.org/3osj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3osj RCSB], [https://www.ebi.ac.uk/pdbsum/3osj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3osj ProSAT]</span></td></tr>
-
 
+
</table>
-
===X-Ray Structure of Phycobilisome LCM core-membrane linker polypeptide (fragment 254-400) from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR209C===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/APCE_SYNY3 APCE_SYNY3] This protein is postulated to act both as terminal energy acceptor (by its phycobilin-like domains) and as a linker polypeptide (by its repeats and arms) that stabilizes the phycobilisome core architecture. Has intrinsic bilin lyase activity (By similarity).
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[3osj]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechocystis_sp._pcc_6803 Synechocystis sp. pcc 6803]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3OSJ OCA].
+
Check<jmol>
-
[[Category: Synechocystis sp. pcc 6803]]
+
<jmolCheckbox>
-
[[Category: Acton, T B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/os/3osj_consurf.spt"</scriptWhenChecked>
-
[[Category: Ciccosanti, C.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Everett, J K.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Hunt, J F.]]
+
</jmolCheckbox>
-
[[Category: Kuzin, A.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3osj ConSurf].
-
[[Category: Lee, D.]]
+
<div style="clear:both"></div>
-
[[Category: Lew, S.]]
+
__TOC__
-
[[Category: Montelione, G T.]]
+
</StructureSection>
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Large Structures]]
-
[[Category: Nair, R.]]
+
[[Category: Synechocystis sp. PCC 6803]]
-
[[Category: Rost, B.]]
+
[[Category: Acton TB]]
-
[[Category: Sahdev, S.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Everett JK]]
-
[[Category: Su, M.]]
+
[[Category: Hunt JF]]
-
[[Category: Tong, L.]]
+
[[Category: Kuzin A]]
-
[[Category: Xiao, R.]]
+
[[Category: Lee D]]
-
[[Category: Nesg]]
+
[[Category: Lew S]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Montelione GT]]
-
[[Category: Protein binding]]
+
[[Category: Nair R]]
-
[[Category: Protein structure initiative]]
+
[[Category: Rost B]]
-
[[Category: Psi-biology]]
+
[[Category: Sahdev S]]
-
[[Category: Structural genomic]]
+
[[Category: Seetharaman J]]
 +
[[Category: Su M]]
 +
[[Category: Tong L]]
 +
[[Category: Xiao R]]

Current revision

X-Ray Structure of Phycobilisome LCM core-membrane linker polypeptide (fragment 254-400) from Synechocystis sp. PCC 6803, Northeast Structural Genomics Consortium Target SgR209C

PDB ID 3osj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools