4aij

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: '''Unreleased structure''' The entry 4aij is ON HOLD until Paper Publication Authors: Quade, N., Mendonca, C., Herbst, K., Heroven, A.K., Heinz, D.W., Dersch, P. Description: Crystal s...)
Current revision (11:27, 20 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4aij is ON HOLD until Paper Publication
+
==Crystal structure of RovA from Yersinia in complex with a rovA promoter fragment==
 +
<StructureSection load='4aij' size='340' side='right'caption='[[4aij]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4aij]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AIJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AIJ FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4aij FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4aij OCA], [https://pdbe.org/4aij PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4aij RCSB], [https://www.ebi.ac.uk/pdbsum/4aij PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4aij ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/SLYA_YERPY SLYA_YERPY] Transcription regulator that can specifically activate or repress expression of target genes.[HAMAP-Rule:MF_01819]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Pathogens often rely on thermosensing to adjust virulence gene expression. In yersiniae, important virulence-associated traits are under the control of the master regulator RovA which uses an in-built thermosensor to control its activity. Thermal upshifts encountered upon host entry induce conformational changes of the RovA dimer that attenuate DNA-binding and render the protein more susceptible to proteolysis. Here, we report the crystal structure of RovA in the free and DNA-bound form and provide evidence that thermo-induced loss of RovA activity is mainly promoted by a thermosensing loop in the dimerization domain and residues in the adjacent C-terminal helix. These determinants allow partial unfolding of the regulator upon an upshift to 37 degrees C. This structural distortion is transmitted to the flexible DNA-binding domain of RovA. RovA mainly contacts the DNA backbone in a low affinity-binding mode which allows the immediate release of RovA from its operator sites. We also show that SlyA, a close homologue of RovA from Salmonella with a very similar structure, is not a thermosensor and remains active and stable at 37 degrees C. Strikingly, changes in only three amino acids, reflecting evolutionary replacements in SlyA, result in a complete loss of the thermosensing properties of RovA and prevent degradation. In conclusion, only minor alterations can transform a thermotolerant regulator into a thermosensor that allows adjustment of virulence and fitness determinants to their thermal environment.
-
Authors: Quade, N., Mendonca, C., Herbst, K., Heroven, A.K., Heinz, D.W., Dersch, P.
+
Structural basis for intrinsic thermosensing by the master virulence regulator RovA of Yersinia.,Quade N, Mendonca C, Herbst K, Heroven AK, Ritter C, Heinz DW, Dersch P J Biol Chem. 2012 Aug 30. PMID:22936808<ref>PMID:22936808</ref>
-
Description: Crystal structure of RovA from Yersinia in complex with a rovA promoter fragment
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 4aij" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Yersinia pseudotuberculosis]]
 +
[[Category: Dersch P]]
 +
[[Category: Heinz DW]]
 +
[[Category: Herbst K]]
 +
[[Category: Heroven AK]]
 +
[[Category: Mendonca C]]
 +
[[Category: Quade N]]

Current revision

Crystal structure of RovA from Yersinia in complex with a rovA promoter fragment

PDB ID 4aij

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools