4aik
From Proteopedia
(Difference between revisions)
(New page: '''Unreleased structure''' The entry 4aik is ON HOLD until Paper Publication Authors: Quade, N., Mendonca, C., Herbst, K., Heroven, A.K., Heinz, D.W., Dersch, P. Description: Crystal s...) |
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- | '''Unreleased structure''' | ||
- | + | ==Crystal structure of RovA from Yersinia in complex with an invasin promoter fragment== | |
+ | <StructureSection load='4aik' size='340' side='right'caption='[[4aik]], [[Resolution|resolution]] 1.85Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4aik]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Yersinia_pseudotuberculosis Yersinia pseudotuberculosis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AIK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AIK FirstGlance]. <br> | ||
+ | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85Å</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4aik FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4aik OCA], [https://pdbe.org/4aik PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4aik RCSB], [https://www.ebi.ac.uk/pdbsum/4aik PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4aik ProSAT]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [https://www.uniprot.org/uniprot/SLYA_YERPY SLYA_YERPY] Transcription regulator that can specifically activate or repress expression of target genes.[HAMAP-Rule:MF_01819] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Pathogens often rely on thermosensing to adjust virulence gene expression. In yersiniae, important virulence-associated traits are under the control of the master regulator RovA which uses an in-built thermosensor to control its activity. Thermal upshifts encountered upon host entry induce conformational changes of the RovA dimer that attenuate DNA-binding and render the protein more susceptible to proteolysis. Here, we report the crystal structure of RovA in the free and DNA-bound form and provide evidence that thermo-induced loss of RovA activity is mainly promoted by a thermosensing loop in the dimerization domain and residues in the adjacent C-terminal helix. These determinants allow partial unfolding of the regulator upon an upshift to 37 degrees C. This structural distortion is transmitted to the flexible DNA-binding domain of RovA. RovA mainly contacts the DNA backbone in a low affinity-binding mode which allows the immediate release of RovA from its operator sites. We also show that SlyA, a close homologue of RovA from Salmonella with a very similar structure, is not a thermosensor and remains active and stable at 37 degrees C. Strikingly, changes in only three amino acids, reflecting evolutionary replacements in SlyA, result in a complete loss of the thermosensing properties of RovA and prevent degradation. In conclusion, only minor alterations can transform a thermotolerant regulator into a thermosensor that allows adjustment of virulence and fitness determinants to their thermal environment. | ||
- | + | Structural basis for intrinsic thermosensing by the master virulence regulator RovA of Yersinia.,Quade N, Mendonca C, Herbst K, Heroven AK, Ritter C, Heinz DW, Dersch P J Biol Chem. 2012 Aug 30. PMID:22936808<ref>PMID:22936808</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
+ | </div> | ||
+ | <div class="pdbe-citations 4aik" style="background-color:#fffaf0;"></div> | ||
+ | |||
+ | ==See Also== | ||
+ | *[[Transcriptional activator 3D structures|Transcriptional activator 3D structures]] | ||
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
+ | [[Category: Large Structures]] | ||
+ | [[Category: Yersinia pseudotuberculosis]] | ||
+ | [[Category: Dersch P]] | ||
+ | [[Category: Heinz DW]] | ||
+ | [[Category: Herbst K]] | ||
+ | [[Category: Heroven AK]] | ||
+ | [[Category: Mendonca C]] | ||
+ | [[Category: Quade N]] |
Current revision
Crystal structure of RovA from Yersinia in complex with an invasin promoter fragment
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