3qr7

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:49, 21 February 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3qr7.png|left|200px]]
 
-
<!--
+
==Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV==
-
The line below this paragraph, containing "STRUCTURE_3qr7", creates the "Structure Box" on the page.
+
<StructureSection load='3qr7' size='340' side='right'caption='[[3qr7]], [[Resolution|resolution]] 0.94&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3qr7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_P2 Escherichia virus P2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QR7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QR7 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.94&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
-
{{STRUCTURE_3qr7| PDB=3qr7 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qr7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qr7 OCA], [https://pdbe.org/3qr7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qr7 RCSB], [https://www.ebi.ac.uk/pdbsum/3qr7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qr7 ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/SPIKE_BPP2 SPIKE_BPP2] Forms the small spikes on the baseplate that plug the end of the tube before DNA ejection and form a channel perforating the host membrane during ejection. Involved in baseplate assembly.<ref>PMID:21821878</ref> <ref>PMID:22325780</ref>
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22325780}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 22325780 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Escherichia virus P2]]
-
{{ABSTRACT_PUBMED_22325780}}
+
[[Category: Large Structures]]
-
 
+
[[Category: Browning C]]
-
==About this Structure==
+
[[Category: Leiman PG]]
-
[[3qr7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_p2 Enterobacteria phage p2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QR7 OCA].
+
[[Category: Shneider M]]
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022325780</ref><references group="xtra"/>
+
-
[[Category: Enterobacteria phage p2]]
+
-
[[Category: Browning, C.]]
+
-
[[Category: Leiman, P G.]]
+
-
[[Category: Shneider, M.]]
+
-
[[Category: Beta-helix]]
+
-
[[Category: Cell membrane piercing]]
+
-
[[Category: Iron-binding]]
+
-
[[Category: Ob-fold]]
+
-
[[Category: Phage baseplate]]
+
-
[[Category: Tail spike]]
+
-
[[Category: Viral protein]]
+

Current revision

Crystal structure of the C-terminal fragment of the bacteriophage P2 membrane-piercing protein gpV

PDB ID 3qr7

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools