3c37

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="3c37" size="350" color="white" frame="true" align="right" spinBox="true" caption="3c37, resolution 1.70&Aring;" /> '''X-ray structure of t...)
Current revision (08:51, 30 October 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3c37.jpg|left|200px]]<br /><applet load="3c37" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="3c37, resolution 1.70&Aring;" />
 
-
'''X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A'''<br />
 
-
==About this Structure==
+
==X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A==
-
3C37 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacter_sulfurreducens_pca Geobacter sulfurreducens pca] with <scene name='pdbligand=ZN:'>ZN</scene> and <scene name='pdbligand=PEG:'>PEG</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Known structural/functional Sites: <scene name='pdbsite=AC1:Zn+Binding+Site+For+Residue+A+301'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+B+301'>AC2</scene>, <scene name='pdbsite=AC3:Peg+Binding+Site+For+Residue+A+400'>AC3</scene> and <scene name='pdbsite=AC4:Peg+Binding+Site+For+Residue+B+400'>AC4</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA].
+
<StructureSection load='3c37' size='340' side='right'caption='[[3c37]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-
[[Category: Geobacter sulfurreducens pca]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[3c37]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacter_sulfurreducens_PCA Geobacter sulfurreducens PCA]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C37 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C37 FirstGlance]. <br>
-
[[Category: Acton, T.B.]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-
[[Category: Baran, M.C.]]
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
[[Category: Forouhar, F.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c37 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c37 OCA], [https://pdbe.org/3c37 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c37 RCSB], [https://www.ebi.ac.uk/pdbsum/3c37 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c37 ProSAT], [https://www.topsan.org/Proteins/NESGC/3c37 TOPSAN]</span></td></tr>
-
[[Category: Hunt, J.F.]]
+
</table>
-
[[Category: Kuzin, A.P.]]
+
== Function ==
-
[[Category: Liu, J.]]
+
[https://www.uniprot.org/uniprot/Q74D82_GEOSL Q74D82_GEOSL]
-
[[Category: Maglaqui, M.]]
+
== Evolutionary Conservation ==
-
[[Category: Mao, L.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Montelione, G.T.]]
+
Check<jmol>
-
[[Category: NESG, Northeast.Structural.Genomics.Consortium.]]
+
<jmolCheckbox>
-
[[Category: Rost, B.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/c3/3c37_consurf.spt"</scriptWhenChecked>
-
[[Category: Seetharaman, J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-
[[Category: Tong, L.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Vorobiev, S.M.]]
+
</jmolCheckbox>
-
[[Category: Wang, D.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3c37 ConSurf].
-
[[Category: Xiao, R.]]
+
<div style="clear:both"></div>
-
[[Category: Yang, C.]]
+
__TOC__
-
[[Category: PEG]]
+
</StructureSection>
-
[[Category: ZN]]
+
[[Category: Geobacter sulfurreducens PCA]]
-
[[Category: gsr143a]]
+
[[Category: Large Structures]]
-
[[Category: hydrolase]]
+
[[Category: Acton TB]]
-
[[Category: m48 family]]
+
[[Category: Baran MC]]
-
[[Category: metalloprotease]]
+
[[Category: Chen Y]]
-
[[Category: nesg]]
+
[[Category: Forouhar F]]
-
[[Category: northeast structural genomics consortium]]
+
[[Category: Hunt JF]]
-
[[Category: peptidase]]
+
[[Category: Kuzin AP]]
-
[[Category: protease]]
+
[[Category: Liu J]]
-
[[Category: protein structure initiative]]
+
[[Category: Maglaqui M]]
-
[[Category: psi-2]]
+
[[Category: Mao L]]
-
[[Category: q74d82]]
+
[[Category: Montelione GT]]
-
[[Category: structural genomics]]
+
[[Category: Rost B]]
-
[[Category: x-ray]]
+
[[Category: Seetharaman J]]
-
[[Category: zinc]]
+
[[Category: Tong L]]
-
 
+
[[Category: Vorobiev SM]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 13 08:24:35 2008''
+
[[Category: Wang D]]
 +
[[Category: Xiao R]]

Current revision

X-ray structure of the putative Zn-dependent peptidase Q74D82 at the resolution 1.7 A. Northeast Structural Genomics Consortium target GsR143A

PDB ID 3c37

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3c37"
Personal tools