1e9t

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[[Image:1e9t.jpg|left|200px]]<br /><applet load="1e9t" size="350" color="white" frame="true" align="right" spinBox="true"
 
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caption="1e9t" />
 
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'''HIGH RESOLUTION SOLUTION STRUCTURE OF HUMAN INTESTINAL TREFOIL FACTOR'''<br />
 
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==Overview==
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==High resolution solution structure of human intestinal trefoil factor==
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The secreted proteins intestinal trefoil factor (ITF, 59 residues), pS2, (60 residues), and spasmolytic polypeptide (SP, 106 residues) form a small, family of trefoil domain-containing mammalian cell motility factors, which, are essential for the maintenance of all mucous-coated epithelial, surfaces. We have used 1H NMR spectroscopy to determine the, high-resolution structure of human ITF, which has allowed detailed, structural comparisons with the other trefoil cell motility factors. The, conformation of residues 10-53 of hITF is determined to high precision, but the structure of the N- and C-terrminal residues is poorly defined by, the NMR data, which is probably indicative of significant mobility. The, core of the trefoil domain in hITF consists of a two-stranded antiparallel, beta-sheet (Cys 36 to Asp 39 and Trp 47 to Lys 50), which is capped by an, irregular loop and forms a central hairpin (loop 3). The beta-sheet is, preceded by a short alpha-helix (Lys 29 to Arg 34), with the majority of, the remainder of the domain contained in two loops formed from His 25 to, Pro 28 (loop 2) and Ala 12 to Arg 18 (loop 1), which lie on either side of, the central hairpin. The region formed by the surface of loop 2, the cleft, between loop 2 and loop 3, and the adjacent face of loop 3 has previously, been proposed to form the functional site of trefoil domains. Detailed, comparisons of the backbone conformations and surface features of the, family of trefoil cell motility factors (porcine SP, pS2, and hITF) have, identified significant structural and electrostatic differences in the, loop 2/loop 3 regions, which suggest that each trefoil protein has a, specific target or group of target molecules.
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<StructureSection load='1e9t' size='340' side='right'caption='[[1e9t]]' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[1e9t]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E9T OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1E9T FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 85 models</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1e9t FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1e9t OCA], [https://pdbe.org/1e9t PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1e9t RCSB], [https://www.ebi.ac.uk/pdbsum/1e9t PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1e9t ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/TFF3_HUMAN TFF3_HUMAN] Involved in the maintenance and repair of the intestinal mucosa. Promotes the mobility of epithelial cells in healing processes (motogen).<ref>PMID:11694446</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/e9/1e9t_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1e9t ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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The secreted proteins intestinal trefoil factor (ITF, 59 residues), pS2 (60 residues), and spasmolytic polypeptide (SP, 106 residues) form a small family of trefoil domain-containing mammalian cell motility factors, which are essential for the maintenance of all mucous-coated epithelial surfaces. We have used 1H NMR spectroscopy to determine the high-resolution structure of human ITF, which has allowed detailed structural comparisons with the other trefoil cell motility factors. The conformation of residues 10-53 of hITF is determined to high precision, but the structure of the N- and C-terrminal residues is poorly defined by the NMR data, which is probably indicative of significant mobility. The core of the trefoil domain in hITF consists of a two-stranded antiparallel beta-sheet (Cys 36 to Asp 39 and Trp 47 to Lys 50), which is capped by an irregular loop and forms a central hairpin (loop 3). The beta-sheet is preceded by a short alpha-helix (Lys 29 to Arg 34), with the majority of the remainder of the domain contained in two loops formed from His 25 to Pro 28 (loop 2) and Ala 12 to Arg 18 (loop 1), which lie on either side of the central hairpin. The region formed by the surface of loop 2, the cleft between loop 2 and loop 3, and the adjacent face of loop 3 has previously been proposed to form the functional site of trefoil domains. Detailed comparisons of the backbone conformations and surface features of the family of trefoil cell motility factors (porcine SP, pS2, and hITF) have identified significant structural and electrostatic differences in the loop 2/loop 3 regions, which suggest that each trefoil protein has a specific target or group of target molecules.
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==Disease==
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High-resolution solution structure of human intestinal trefoil factor and functional insights from detailed structural comparisons with the other members of the trefoil family of mammalian cell motility factors.,Lemercinier X, Muskett FW, Cheeseman B, McIntosh PB, Thim L, Carr MD Biochemistry. 2001 Aug 14;40(32):9552-9. PMID:11583154<ref>PMID:11583154</ref>
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Known disease associated with this structure: Pitt-Hopkins syndrome OMIM:[[http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=602272 602272]]
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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1E9T is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1E9T OCA].
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</div>
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<div class="pdbe-citations 1e9t" style="background-color:#fffaf0;"></div>
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==Reference==
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== References ==
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High-resolution solution structure of human intestinal trefoil factor and functional insights from detailed structural comparisons with the other members of the trefoil family of mammalian cell motility factors., Lemercinier X, Muskett FW, Cheeseman B, McIntosh PB, Thim L, Carr MD, Biochemistry. 2001 Aug 14;40(32):9552-9. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=11583154 11583154]
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Carr, M.]]
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[[Category: Carr M]]
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[[Category: Cheeseman, B.]]
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[[Category: Cheeseman B]]
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[[Category: Lemercinier, X.]]
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[[Category: Lemercinier X]]
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[[Category: Mcintosh, P.]]
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[[Category: McIntosh P]]
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[[Category: Muskett, F.]]
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[[Category: Muskett F]]
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[[Category: cell motility factor]]
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[[Category: intestinal trefoil factor]]
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[[Category: nmr spectroscopy]]
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[[Category: solution structure]]
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[[Category: trefoil domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Feb 15 15:42:01 2008''
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Current revision

High resolution solution structure of human intestinal trefoil factor

PDB ID 1e9t

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