3gqh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:56, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3gqh.png|left|200px]]
 
-
<!--
+
==Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment==
-
The line below this paragraph, containing "STRUCTURE_3gqh", creates the "Structure Box" on the page.
+
<StructureSection load='3gqh' size='340' side='right'caption='[[3gqh]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3gqh]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_virus_phi29 Bacillus virus phi29]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3GQH FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3gqh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3gqh OCA], [https://pdbe.org/3gqh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3gqh RCSB], [https://www.ebi.ac.uk/pdbsum/3gqh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3gqh ProSAT]</span></td></tr>
-
{{STRUCTURE_3gqh| PDB=3gqh | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment===
+
[https://www.uniprot.org/uniprot/FIB12_BPPH2 FIB12_BPPH2] Structural component of the 12 appendages that hang from the lower collar. Adhesion protein that binds to the host cell surface during virus attachment and mediates teichoic acids degradation.<ref>PMID:7241648</ref>
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_19450535}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 19450535 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gq/3gqh_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_19450535}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3gqh ConSurf].
-
[[3gqh]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_phage_phi29 Bacillus phage phi29]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3GQH OCA].
+
<div style="clear:both"></div>
-
 
+
== References ==
-
==Reference==
+
<references/>
-
<ref group="xtra">PMID:019450535</ref><references group="xtra"/>
+
__TOC__
-
[[Category: Bacillus phage phi29]]
+
</StructureSection>
-
[[Category: Rossmann, M G.]]
+
[[Category: Bacillus virus phi29]]
-
[[Category: Xiang, Y.]]
+
[[Category: Large Structures]]
-
[[Category: Beta barrel]]
+
[[Category: Rossmann MG]]
-
[[Category: Viral protein]]
+
[[Category: Xiang Y]]

Current revision

Crystal Structure of the Bacteriophage phi29 gene product 12 C-terminal fragment

PDB ID 3gqh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3gqh"
Personal tools