3s9d

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:45, 27 November 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3s9d.png|left|200px]]
 
-
<!--
+
==binary complex between IFNa2 and IFNAR2==
-
The line below this paragraph, containing "STRUCTURE_3s9d", creates the "Structure Box" on the page.
+
<StructureSection load='3s9d' size='340' side='right'caption='[[3s9d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3s9d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S9D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3S9D FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9999&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
-
{{STRUCTURE_3s9d| PDB=3s9d | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3s9d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3s9d OCA], [https://pdbe.org/3s9d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3s9d RCSB], [https://www.ebi.ac.uk/pdbsum/3s9d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3s9d ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/IFNA2_HUMAN IFNA2_HUMAN] Produced by macrophages, IFN-alpha have antiviral activities.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Type I Interferons (IFNs) are important cytokines for innate immunity against viruses and cancer. Sixteen human type I IFN variants signal through the same cell-surface receptors, IFNAR1 and IFNAR2, yet they can evoke markedly different physiological effects. The crystal structures of two human type I IFN ternary signaling complexes containing IFNalpha2 and IFNomega reveal recognition modes and heterotrimeric architectures that are unique among the cytokine receptor superfamily but conserved between different type I IFNs. Receptor-ligand cross-reactivity is enabled by conserved receptor-ligand "anchor points" interspersed among ligand-specific interactions that "tune" the relative IFN-binding affinities, in an apparent extracellular "ligand proofreading" mechanism that modulates biological activity. Functional differences between IFNs are linked to their respective receptor recognition chemistries, in concert with a ligand-induced conformational change in IFNAR1, that collectively control signal initiation and complex stability, ultimately regulating differential STAT phosphorylation profiles, receptor internalization rates, and downstream gene expression patterns.
-
===binary complex between IFNa2 and IFNAR2===
+
Structural linkage between ligand discrimination and receptor activation by type I interferons.,Thomas C, Moraga I, Levin D, Krutzik PO, Podoplelova Y, Trejo A, Lee C, Yarden G, Vleck SE, Glenn JS, Nolan GP, Piehler J, Schreiber G, Garcia KC Cell. 2011 Aug 19;146(4):621-32. PMID:21854986<ref>PMID:21854986</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_21854986}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 3s9d" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 21854986 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_21854986}}
+
-
 
+
-
==About this Structure==
+
-
[[3s9d]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3S9D OCA].
+
==See Also==
==See Also==
-
*[[Interactive 3D Complements in Proteopedia]]
+
*[[Interferon 3D structures|Interferon 3D structures]]
-
 
+
*[[Interferon receptor|Interferon receptor]]
-
==Reference==
+
*[[Interferon receptor 3D structures|Interferon receptor 3D structures]]
-
<ref group="xtra">PMID:021854986</ref><references group="xtra"/>
+
*[[Multiple sclerosis|Multiple sclerosis]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Garcia, K C.]]
+
[[Category: Large Structures]]
-
[[Category: Thomas, C.]]
+
[[Category: Garcia KC]]
-
[[Category: Human]]
+
[[Category: Thomas C]]
-
[[Category: Ifna2]]
+
-
[[Category: Ifnar2]]
+
-
[[Category: Signaling protein-receptor complex]]
+
-
[[Category: Sub-complex of the interferon signaling complex]]
+
-
[[Category: Type i interferon]]
+

Current revision

binary complex between IFNa2 and IFNAR2

PDB ID 3s9d

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools