2xdw

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[[Image:2xdw.png|left|200px]]
 
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==Inhibition of Prolyl Oligopeptidase with a Synthetic Unnatural Dipeptide==
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The line below this paragraph, containing "STRUCTURE_2xdw", creates the "Structure Box" on the page.
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<StructureSection load='2xdw' size='340' side='right'caption='[[2xdw]], [[Resolution|resolution]] 1.35&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2xdw]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XDW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2XDW FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.35&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=PHQ:BENZYL+CHLOROCARBONATE'>PHQ</scene>, <scene name='pdbligand=TAM:TRIS(HYDROXYETHYL)AMINOMETHANE'>TAM</scene>, <scene name='pdbligand=YCP:(2S)-PIPERIDINE-2-CARBOXYLIC+ACID'>YCP</scene></td></tr>
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{{STRUCTURE_2xdw| PDB=2xdw | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2xdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2xdw OCA], [https://pdbe.org/2xdw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2xdw RCSB], [https://www.ebi.ac.uk/pdbsum/2xdw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2xdw ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/PPCE_PIG PPCE_PIG] Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/2xdw_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2xdw ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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A new inhibitor, containing a linked proline-piperidine structure, for the enzyme prolyl oligopeptidase (POP) has been synthesised and demonstrated to bind covalently with the enzyme at the active site. This provides evidence that covalent inhibitors of POP do not have to be limited to structures containing five-membered N-containing heterocyclic rings.
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===Inhibition of Prolyl Oligopeptidase with a Synthetic Unnatural Dipeptide===
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Inhibition of prolyl oligopeptidase with a synthetic unnatural dipeptide.,Racys DT, Rea D, Fulop V, Wills M Bioorg Med Chem. 2010 Jul 1;18(13):4775-82. Epub 2010 May 31. PMID:20627594<ref>PMID:20627594</ref>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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The line below this paragraph, {{ABSTRACT_PUBMED_20627594}}, adds the Publication Abstract to the page
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<div class="pdbe-citations 2xdw" style="background-color:#fffaf0;"></div>
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(as it appears on PubMed at http://www.pubmed.gov), where 20627594 is the PubMed ID number.
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{{ABSTRACT_PUBMED_20627594}}
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==About this Structure==
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[[2xdw]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Sus_scrofa Sus scrofa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2XDW OCA].
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==See Also==
==See Also==
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*[[Prolyl Endopeptidase]]
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*[[Prolyl Endopeptidase|Prolyl Endopeptidase]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:020627594</ref><references group="xtra"/>
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__TOC__
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[[Category: Prolyl oligopeptidase]]
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</StructureSection>
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[[Category: Large Structures]]
[[Category: Sus scrofa]]
[[Category: Sus scrofa]]
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[[Category: Fulop, V.]]
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[[Category: Synthetic construct]]
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[[Category: Racys, D T.]]
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[[Category: Fulop V]]
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[[Category: Rea, D.]]
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[[Category: Racys DT]]
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[[Category: Wills, M.]]
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[[Category: Rea D]]
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[[Category: Alpha/beta-hydrolase]]
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[[Category: Wills M]]
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[[Category: Amnesia]]
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[[Category: Beta-propeller]]
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[[Category: Hydrolase]]
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[[Category: Inhibitor]]
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Current revision

Inhibition of Prolyl Oligopeptidase with a Synthetic Unnatural Dipeptide

PDB ID 2xdw

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