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4dkz

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[[Image:4dkz.jpg|left|200px]]
 
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==Hairpin structure of a DNA dodecamer containing North-methanocarba-2'-deoxythymidine==
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The line below this paragraph, containing "STRUCTURE_4dkz", creates the "Structure Box" on the page.
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<StructureSection load='4dkz' size='340' side='right'caption='[[4dkz]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[4dkz]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DKZ FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=0KZ:[(1R,2S,4S,5S)-2-HYDROXY-4-(5-METHYL-2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)BICYCLO[3.1.0]HEX-1-YL]METHYL+DIHYDROGEN+PHOSPHATE'>0KZ</scene></td></tr>
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{{STRUCTURE_4dkz| PDB=4dkz | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dkz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dkz OCA], [https://pdbe.org/4dkz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dkz RCSB], [https://www.ebi.ac.uk/pdbsum/4dkz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dkz ProSAT]</span></td></tr>
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</table>
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===Hairpin structure of a DNA dodecamer containing North-methanocarba-2'-deoxythymidine===
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__TOC__
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</StructureSection>
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[[Category: Large Structures]]
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[[Category: Egli M]]
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The line below this paragraph, {{ABSTRACT_PUBMED_22409313}}, adds the Publication Abstract to the page
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[[Category: Pallan PS]]
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(as it appears on PubMed at http://www.pubmed.gov), where 22409313 is the PubMed ID number.
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{{ABSTRACT_PUBMED_22409313}}
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==About this Structure==
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[[4dkz]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DKZ OCA].
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==Reference==
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<ref group="xtra">PMID:022409313</ref><references group="xtra"/>
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[[Category: Egli, M.]]
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[[Category: Pallan, P S.]]
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[[Category: C4'-exo pucker]]
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[[Category: Dna]]
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[[Category: Hairpin dna]]
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[[Category: N-mcdt]]
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[[Category: North-methanocarba-2'-deoxythymidine]]
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[[Category: Tetra-loop hairpin]]
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[[Category: X-ray crystal structure]]
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Current revision

Hairpin structure of a DNA dodecamer containing North-methanocarba-2'-deoxythymidine

PDB ID 4dkz

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