4ec6

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'''Unreleased structure'''
 
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The entry 4ec6 is ON HOLD until Paper Publication
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==Ntf2-like, potential transfer protein TraM from Gram-positive conjugative plasmid pIP501==
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<StructureSection load='4ec6' size='340' side='right'caption='[[4ec6]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4ec6]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EC6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EC6 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4ec6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ec6 OCA], [https://pdbe.org/4ec6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4ec6 RCSB], [https://www.ebi.ac.uk/pdbsum/4ec6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4ec6 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q8L1C7_ENTFL Q8L1C7_ENTFL]
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Conjugative plasmid transfer is the most important means of spreading antibiotic resistance and virulence genes among bacteria and therefore, presents a serious threat to human health. The process requires direct cell-cell contact made possible by a multi-protein complex that spans cellular membranes and serves as a channel for macromolecular secretion. Thus far, well studied conjugative T4SS are of G- origin. Although many medically relevant pathogens (e.g. enterococci, staphylococci, streptococci) are G+, their conjugation systems have received little attention. This study provides structural information for the transfer protein TraM of the G+ broad-host range Enterococcus conjugative plasmid pIP501. Immuno-localization demonstrated that the protein localizes to the cell wall. We then used opsonophagocytosis (OPA) as a novel tool to verify that TraM was exposed on the cell surface. In these assays antibodies generated to TraM recruited macrophages and enabled killing of pIP501 harboring E. faecalis cells. The crystal structure of the C-terminal, surface exposed domain of TraM was determined to 2.5 A resolution. The structure, molecular dynamics and cross-linking studies indicated that a TraM trimer acts as the biological unit. Despite the absence of sequence-based similarity, TraM unexpectedly displayed a fold similar to the T4SS VirB8 proteins from Agrobacterium tumefaciens and Brucella suis (G-) and to the transfer protein TcpC from Clostridium perfringens plasmid pCW3 (G+). Based on the alignments of secondary structure elements of VirB8-like proteins from mobile genetic elements and chromosomally encoded T4SS from G+ and G- bacteria, we propose a new classification scheme of VirB8-like proteins.
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Authors: Goessweiner-Mohr, N., Grumet, L., Pavkov-Keller, T., Wang, M., Keller, W.
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The 2.5 A Structure of the Enterococcus Conjugation Protein TraM resembles VirB8 Type IV Secretion Proteins.,Goessweiner-Mohr N, Grumet L, Arends K, Pavkov-Keller T, Gruber CC, Gruber K, Birner-Gruenberger R, Kropec-Huebner A, Huebner J, Grohmann E, Keller W J Biol Chem. 2012 Nov 27. PMID:23188825<ref>PMID:23188825</ref>
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Description: Ntf2-like, potential transfer protein TraM from Gram-positive conjugative plasmid pIP501
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4ec6" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Enterococcus faecalis]]
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[[Category: Large Structures]]
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[[Category: Goessweiner-Mohr N]]
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[[Category: Grumet L]]
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[[Category: Keller W]]
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[[Category: Pavkov-Keller T]]
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[[Category: Wang M]]

Current revision

Ntf2-like, potential transfer protein TraM from Gram-positive conjugative plasmid pIP501

PDB ID 4ec6

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