3vis

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:48, 30 October 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3vis.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of cutinase Est119 from Thermobifida alba AHK119==
-
The line below this paragraph, containing "STRUCTURE_3vis", creates the "Structure Box" on the page.
+
<StructureSection load='3vis' size='340' side='right'caption='[[3vis]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3vis]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermobifida_alba Thermobifida alba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VIS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3VIS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr>
-
{{STRUCTURE_3vis| PDB=3vis | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3vis FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vis OCA], [https://pdbe.org/3vis PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3vis RCSB], [https://www.ebi.ac.uk/pdbsum/3vis PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3vis ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of cutinase Est119 from Thermobifida alba AHK119===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/PETH2_THEAE PETH2_THEAE] Catalyzes the hydrolysis of cutin, a polyester that forms the structure of plant cuticle (PubMed:20393707, PubMed:22183084, PubMed:25910960, PubMed:33387709). Shows esterase activity towards p-nitrophenol-linked aliphatic esters (pNP-aliphatic esters) (PubMed:20393707, PubMed:22183084, PubMed:25910960, PubMed:33387709). Capable of degrading the plastic poly(ethylene terephthalate) (PET), the most abundant polyester plastic in the world (By similarity). Can also depolymerize the synthetic polyesters poly(epsilon-caprolactone) (PCL), poly(butylene succinate-co-adipate) (PBSA), poly(butylene succinate) (PBS), and poly(lactic acid) (PLA) (PubMed:20393707, PubMed:22183084).[UniProtKB:D4Q9N1]<ref>PMID:20393707</ref> <ref>PMID:22183084</ref> <ref>PMID:25910960</ref> <ref>PMID:33387709</ref>
-
 
+
== References ==
-
==About this Structure==
+
<references/>
-
[[3vis]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermobifida_alba Thermobifida alba]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VIS OCA].
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermobifida alba]]
[[Category: Thermobifida alba]]
-
[[Category: Karatani, H.]]
+
[[Category: Karatani H]]
-
[[Category: Kawai, F.]]
+
[[Category: Kawai F]]
-
[[Category: Kitadokoro, K.]]
+
[[Category: Kitadokoro K]]
-
[[Category: Nakamura, R.]]
+
[[Category: Nakamura R]]
-
[[Category: Nishimura, K.]]
+
[[Category: Nishimura K]]
-
[[Category: Suzuki, H.]]
+
[[Category: Suzuki H]]
-
[[Category: Thumarat, U.]]
+
[[Category: Thumarat U]]
-
[[Category: Alpha/beta-hydrolase fold]]
+
-
[[Category: Esterase]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Polyethylene terephthalate]]
+

Current revision

Crystal structure of cutinase Est119 from Thermobifida alba AHK119

PDB ID 3vis

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools