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4aq4

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'''Unreleased structure'''
 
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The entry 4aq4 is ON HOLD until Paper Publication
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==substrate bound sn-glycerol-3-phosphate binding periplasmic protein ugpB from Escherichia coli==
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<StructureSection load='4aq4' size='340' side='right'caption='[[4aq4]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4aq4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AQ4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AQ4 FirstGlance]. <br>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CD:CADMIUM+ION'>CD</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=G3P:SN-GLYCEROL-3-PHOSPHATE'>G3P</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4aq4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4aq4 OCA], [https://pdbe.org/4aq4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4aq4 RCSB], [https://www.ebi.ac.uk/pdbsum/4aq4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4aq4 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/UGPB_ECOLI UGPB_ECOLI] sn-glycerol-3-phosphate and glycerophosphoryl diester-binding protein interacts with the binding protein-dependent transport system UgpACE.
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Under phosphate starvation conditions, Escherichia coli can utilize sn-glycerol-3-phosphate (G3P) and G3P diesters as phosphate source when transported by an ATP binding cassette importer composed of the periplasmic binding protein, UgpB, the transmembrane subunits, UgpA and UgpE, and a homodimer of the nucleotide binding subunit, UgpC. The current knowledge on the Ugp transporter is solely based on genetic evidence and transport assays using intact cells. Thus, we set out to characterize its properties at the level of purified protein components. UgpB was demonstrated to bind G3P and glycerophosphocholine with dissociation constants of 0.68 +/- 0.02 muM and 5.1 +/- 0.3 muM, respectively, while glycerol-2-phosphate (G2P) is not a substrate. The crystal structure of UgpB in complex with G3P was solved at 1.8 A resolution and revealed the interaction with two tryptophan residues as key to the preferential binding of linear G3P in contrast to the branched G2P. Mutational analysis validated the crucial role of Trp-169 for G3P binding. The purified UgpAEC(2) complex displayed UgpB/G3P-stimulated ATPase activity in proteoliposomes that was neither inhibited by phosphate nor by the signal transducing protein PhoU or the phosphodiesterase UgpQ. Furthermore, a hybrid transporter composed of MalFG-UgpC could be functionally reconstituted while a UgpAE-MalK complex was unstable.
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Authors: Wuttge, S., Bommer, M., Jaeger, F., Martins, B., Jacob, S., Licht, A., Scheffel, F., Dobbek, H., Schneider, E.
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Determinants of substrate specificity and biochemical properties of the sn-glycerol-3-phosphate ATP binding cassette transporter (UgpB-AEC(2) ) of Escherichia coli.,Wuttge S, Bommer M, Jager F, Martins BM, Jacob S, Licht A, Scheffel F, Dobbek H, Schneider E Mol Microbiol. 2012 Sep 27. doi: 10.1111/mmi.12025. PMID:23013274<ref>PMID:23013274</ref>
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Description: substrate bound sn-glycerol-3-phosphate binding periplasmic protein ugpB from Escherichia coli
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
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<div class="pdbe-citations 4aq4" style="background-color:#fffaf0;"></div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
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[[Category: Escherichia coli K-12]]
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[[Category: Large Structures]]
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[[Category: Bommer M]]
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[[Category: Dobbek H]]
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[[Category: Jacob S]]
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[[Category: Jaeger F]]
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[[Category: Licht A]]
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[[Category: Martins BM]]
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[[Category: Scheffel F]]
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[[Category: Schneider E]]
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[[Category: Wuttge S]]

Current revision

substrate bound sn-glycerol-3-phosphate binding periplasmic protein ugpB from Escherichia coli

PDB ID 4aq4

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