2lj9

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:17, 30 October 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2lj9.jpg|left|200px]]
 
-
<!--
+
==Partial 3d structure of the c-terminal part of the free arabidopsis thaliana cp12-2 in its oxidized form==
-
The line below this paragraph, containing "STRUCTURE_2lj9", creates the "Structure Box" on the page.
+
<StructureSection load='2lj9' size='340' side='right'caption='[[2lj9]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2lj9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJ9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2LJ9 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2lj9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2lj9 OCA], [https://pdbe.org/2lj9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2lj9 RCSB], [https://www.ebi.ac.uk/pdbsum/2lj9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2lj9 ProSAT]</span></td></tr>
-
{{STRUCTURE_2lj9| PDB=2lj9 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CP122_ARATH CP122_ARATH] Acts as a linker essential in the assembly of a core complex of PRK/GAPDH. Coordinates the reversible inactivation of chloroplast enzymes GAPDH and PRK during darkness in photosynthetic tissues.<ref>PMID:16258009</ref> <ref>PMID:20399532</ref>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Carbon assimilation in plants is regulated by the reduction of specific protein disulfides by light and their re-oxidation in the dark. The redox switch CP12 is an intrinsically disordered protein that can form two disulfide bridges. In the dark oxidized CP12 forms an inactive supramolecular complex with glyceraldehyde-3-phosphate dehydrogenase (GAPDH) and phosphoribulokinase, two enzymes of the carbon assimilation cycle. Here we show that binding of CP12 to GAPDH, the first step of ternary complex formation, follows an integrated mechanism that combines conformational selection with induced folding steps. Initially, a CP12 conformation characterized by a circular structural motif including the C-terminal disulfide is selected by GAPDH. Subsequently, the induced folding of the flexible C-terminal tail of CP12 in the active site of GAPDH stabilizes the binary complex. Formation of several hydrogen bonds compensates the entropic cost of CP12 fixation and terminates the interaction mechanism that contributes to carbon assimilation control.
-
===Partial 3d structure of the c-terminal part of the free arabidopsis thaliana cp12-2 in its oxidized form===
+
Conformational Selection and Folding-upon-binding of Intrinsically Disordered Protein CP12 Regulate Photosynthetic Enzymes Assembly.,Fermani S, Trivelli X, Sparla F, Thumiger A, Calvaresi M, Marri L, Falini G, Zerbetto F, Trost P J Biol Chem. 2012 Jun 15;287(25):21372-83. Epub 2012 Apr 18. PMID:22514274<ref>PMID:22514274</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
==About this Structure==
+
</div>
-
[[2lj9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2LJ9 OCA].
+
<div class="pdbe-citations 2lj9" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Arabidopsis thaliana]]
[[Category: Arabidopsis thaliana]]
-
[[Category: Marri, L.]]
+
[[Category: Large Structures]]
-
[[Category: Sparla, F.]]
+
[[Category: Marri L]]
-
[[Category: Trivelli, X.]]
+
[[Category: Sparla F]]
-
[[Category: Trost, P.]]
+
[[Category: Trivelli X]]
-
[[Category: Helix]]
+
[[Category: Trost P]]
-
[[Category: Intrinsically disordered protein]]
+
-
[[Category: Protein binding]]
+

Current revision

Partial 3d structure of the c-terminal part of the free arabidopsis thaliana cp12-2 in its oxidized form

PDB ID 2lj9

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools