3hje

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:14, 30 October 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3hje.png|left|200px]]
 
-
<!--
+
==Crystal structure of sulfolobus tokodaii hypothetical maltooligosyl trehalose synthase==
-
The line below this paragraph, containing "STRUCTURE_3hje", creates the "Structure Box" on the page.
+
<StructureSection load='3hje' size='340' side='right'caption='[[3hje]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3hje]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Sulfurisphaera_tokodaii_str._7 Sulfurisphaera tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HJE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HJE FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
-
{{STRUCTURE_3hje| PDB=3hje | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hje FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hje OCA], [https://pdbe.org/3hje PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hje RCSB], [https://www.ebi.ac.uk/pdbsum/3hje PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hje ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q973H2_SULTO Q973H2_SULTO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hj/3hje_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hje ConSurf].
 +
<div style="clear:both"></div>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The Sulfolobus tokodaii protein ST0929 shares close structural homology with S. acidocaldarius maltooligosyl trehalose synthase (SaMTSase), suggesting that the two enzymes share a common enzymatic mechanism. MTSase is one of a pair of enzymes that catalyze trehalose biosynthesis. The relative geometries of the ST0929 and SaMTSase active sites were found to be essentially identical. ST0929 also includes the unique tyrosine cluster that encloses the reducing-end glucose subunit in Sulfolobus sp. MTSases. The current structure provides insight into the structural basis of the increase in the hydrolase side reaction that is observed for mutants in which a phenylalanine residue is replaced by a tyrosine residue in the subsite +1 tyrosine cluster of Sulfolobus sp.
-
===Crystal structure of sulfolobus tokodaii hypothetical maltooligosyl trehalose synthase===
+
Structure of ST0929, a putative glycosyl transferase from Sulfolobus tokodaii.,Cielo CB, Okazaki S, Suzuki A, Mizushima T, Masui R, Kuramitsu S, Yamane T Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Apr 1;66(Pt 4):397-400., Epub 2010 Mar 26. PMID:20383007<ref>PMID:20383007</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<!--
+
</div>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20383007}}, adds the Publication Abstract to the page
+
<div class="pdbe-citations 3hje" style="background-color:#fffaf0;"></div>
-
(as it appears on PubMed at http://www.pubmed.gov), where 20383007 is the PubMed ID number.
+
== References ==
-
-->
+
<references/>
-
{{ABSTRACT_PUBMED_20383007}}
+
__TOC__
-
 
+
</StructureSection>
-
==About this Structure==
+
[[Category: Large Structures]]
-
[[3hje]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_tokodaii_str._7 Sulfolobus tokodaii str. 7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HJE OCA].
+
[[Category: Sulfurisphaera tokodaii str. 7]]
-
 
+
[[Category: Cielo CBC]]
-
==Reference==
+
[[Category: Kuramitsu S]]
-
<ref group="xtra">PMID:020383007</ref><references group="xtra"/>
+
[[Category: Masui R]]
-
[[Category: Sulfolobus tokodaii str. 7]]
+
[[Category: Mizushima T]]
-
[[Category: Cielo, C B.C.]]
+
[[Category: Okazaki S]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Suzuki A]]
-
[[Category: Masui, R.]]
+
[[Category: Yamane T]]
-
[[Category: Mizushima, T.]]
+
-
[[Category: Okazaki, S.]]
+
-
[[Category: Suzuki, A.]]
+
-
[[Category: Yamane, T.]]
+
-
[[Category: Family 13 glycoside hydrolase]]
+
-
[[Category: Sulfolobus tokodaii]]
+
-
[[Category: Transferase]]
+
-
[[Category: Trehalose biosynthesis]]
+
-
[[Category: Tyrosine cluster]]
+

Current revision

Crystal structure of sulfolobus tokodaii hypothetical maltooligosyl trehalose synthase

PDB ID 3hje

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/3hje"
Personal tools