This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4dxw

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:48, 20 March 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4dxw.jpg|left|200px]]
 
-
<!--
+
==Crystal structure of NavRh, a voltage-gated sodium channel==
-
The line below this paragraph, containing "STRUCTURE_4dxw", creates the "Structure Box" on the page.
+
<StructureSection load='4dxw' size='340' side='right'caption='[[4dxw]], [[Resolution|resolution]] 3.05&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[4dxw]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alpha_proteobacterium_HIMB114 Alpha proteobacterium HIMB114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DXW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4DXW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.052&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BNG:B-NONYLGLUCOSIDE'>BNG</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=PX4:1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE'>PX4</scene></td></tr>
-
{{STRUCTURE_4dxw| PDB=4dxw | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4dxw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4dxw OCA], [https://pdbe.org/4dxw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4dxw RCSB], [https://www.ebi.ac.uk/pdbsum/4dxw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4dxw ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal structure of NavRh, a voltage-gated sodium channel===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/D0RMU8_9PROT D0RMU8_9PROT]
-
 
+
__TOC__
-
==About this Structure==
+
</StructureSection>
-
[[4dxw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Alpha_proteobacterium_himb114 Alpha proteobacterium himb114]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4DXW OCA].
+
[[Category: Alpha proteobacterium HIMB114]]
-
[[Category: Alpha proteobacterium himb114]]
+
[[Category: Large Structures]]
-
[[Category: Ren, W L.]]
+
[[Category: Ren WL]]
-
[[Category: Wang, J W.]]
+
[[Category: Wang JW]]
-
[[Category: Yan, C Y.]]
+
[[Category: Yan CY]]
-
[[Category: Yan, N.]]
+
[[Category: Yan N]]
-
[[Category: Zhang, X.]]
+
[[Category: Zhang X]]
-
[[Category: Sodium selective]]
+
-
[[Category: Tetrameric]]
+
-
[[Category: Transport protein]]
+
-
[[Category: Voltage-gated ion channel]]
+
-
[[Category: Voltage-gated sodium channel]]
+

Current revision

Crystal structure of NavRh, a voltage-gated sodium channel

PDB ID 4dxw

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools