This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4f8z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4f8z" [edit=sysop:move=sysop])
Current revision (04:42, 7 October 2022) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
-
'''Unreleased structure'''
 
-
The entry 4f8z is ON HOLD
+
==Carboxypeptidase T with Boc-Leu==
 +
<StructureSection load='4f8z' size='340' side='right'caption='[[4f8z]], [[Resolution|resolution]] 1.38&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4f8z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoactinomyces_vulgaris Thermoactinomyces vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4F8Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4F8Z FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BL2:N-(TERT-BUTOXYCARBONYL)-L-LEUCINE'>BL2</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4f8z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4f8z OCA], [https://pdbe.org/4f8z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4f8z RCSB], [https://www.ebi.ac.uk/pdbsum/4f8z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4f8z ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/CBPT_THEVU CBPT_THEVU] Able to split off hydrophobic and basic amino acids with comparable efficiency.
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The 3D structure of recombinant bacterial carboxypeptidase T (CPT) in complex with N-BOC-L-leucine was determined at 1.38 A resolution. Crystals for the X-ray study were grown in microgravity using the counter-diffusion technique. N-BOC-L-leucine and SO4(2-) ion bound in the enzyme active site were localized in the electron density map. Location of the leucine side chain in CPT-N-BOC-L-leucine complex allowed identification of the S1 subsite of the enzyme, and its structure was determined. Superposition of the structures of CPT-N-BOC-L-leucine complex and complexes of pancreatic carboxypeptidases A and B with substrate and inhibitors was carried out, and similarity of the S1 subsites in these three carboxypeptidases was revealed. It was found that SO4(2-) ion occupies the same position in the S1' subsite as the C-terminal carboxy group of the substrate.
-
Authors: Timofeev, V.I., Kuznetsov, S.A., Akparov, V.K., Kuranova, I.P.
+
Three-dimensional structure of carboxypeptidase T from Thermoactinomyces vulgaris in complex with N-BOC-L-leucine.,Timofeev VI, Kuznetsov SA, Akparov VKh, Chestukhina GG, Kuranova IP Biochemistry (Mosc). 2013 Mar;78(3):252-9. doi: 10.1134/S0006297913030061. PMID:23586718<ref>PMID:23586718</ref>
-
Description: Carboxypeptidase T with Boc-Leu
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
 +
</div>
 +
<div class="pdbe-citations 4f8z" style="background-color:#fffaf0;"></div>
 +
 
 +
==See Also==
 +
*[[Carboxypeptidase 3D structures|Carboxypeptidase 3D structures]]
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermoactinomyces vulgaris]]
 +
[[Category: Akparov VK]]
 +
[[Category: Kuranova IP]]
 +
[[Category: Kuznetsov SA]]
 +
[[Category: Timofeev VI]]

Current revision

Carboxypeptidase T with Boc-Leu

PDB ID 4f8z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools