4afg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:25, 20 December 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:4afg.jpg|left|200px]]
 
-
<!--
+
==Capitella teleta AChBP in complex with varenicline==
-
The line below this paragraph, containing "STRUCTURE_4afg", creates the "Structure Box" on the page.
+
<StructureSection load='4afg' size='340' side='right'caption='[[4afg]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[4afg]] is a 5 chain structure with sequence from [https://en.wikipedia.org/wiki/Capitella_teleta Capitella teleta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AFG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4AFG FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.001&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=QMR:VARENICLINE'>QMR</scene></td></tr>
-
{{STRUCTURE_4afg| PDB=4afg | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4afg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4afg OCA], [https://pdbe.org/4afg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4afg RCSB], [https://www.ebi.ac.uk/pdbsum/4afg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4afg ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/I6L8L2_CAPTE I6L8L2_CAPTE]
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Partial agonists of the alpha4beta2 nicotinic acetylcholine receptor (nAChR), such as varenicline, are therapeutically used in smoking cessation treatment. These drugs derive their therapeutic effect from fundamental molecular actions, which are to desensitize alpha4beta2 nAChRs and induce channel opening with higher affinity, but lower efficacy than a full agonist at equal receptor occupancy. Here, we report X-ray crystal structures of a unique acetylcholine binding protein (AChBP) from the annelid Capitella teleta, Ct-AChBP, in complex with varenicline or lobeline, which are both partial agonists. These structures highlight the architecture for molecular recognition of these ligands, indicating the contact residues that potentially mediate their molecular actions in alpha4beta2 nAChRs. We then used structure-guided mutagenesis and electrophysiological recordings to pinpoint crucial interactions of varenicline with residues on the complementary face of the binding site in alpha4beta2 nAChRs. We observe that residues in loops D and E are molecular determinants of desensitization and channel opening with limited efficacy by the partial agonist varenicline. Together, this study analyzes molecular recognition of smoking cessation drugs by nAChRs in a structural context.
-
===Capitella teleta AChBP in complex with varenicline===
+
Molecular actions of smoking cessation drugs at alpha4beta2 nicotinic receptors defined in crystal structures of a homologous binding protein.,Billen B, Spurny R, Brams M, van Elk R, Valera-Kummer S, Yakel JL, Voets T, Bertrand D, Smit AB, Ulens C Proc Natl Acad Sci U S A. 2012 Jun 5;109(23):9173-8. Epub 2012 May 22. PMID:22619328<ref>PMID:22619328</ref>
-
 
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
==About this Structure==
+
</div>
-
[[4afg]] is a 5 chain structure with sequence from [http://en.wikipedia.org/wiki/Capitella_teleta Capitella teleta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4AFG OCA].
+
<div class="pdbe-citations 4afg" style="background-color:#fffaf0;"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Capitella teleta]]
[[Category: Capitella teleta]]
-
[[Category: Brams, M.]]
+
[[Category: Large Structures]]
-
[[Category: Spurny, R.]]
+
[[Category: Brams M]]
-
[[Category: Ulens, C.]]
+
[[Category: Spurny R]]
-
[[Category: Acetylcholine-binding protein]]
+
[[Category: Ulens C]]
-
[[Category: Ion channel]]
+
-
[[Category: Nicotinic receptor]]
+

Current revision

Capitella teleta AChBP in complex with varenicline

PDB ID 4afg

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools