3f9r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3f9r" [edit=sysop:move=sysop])
Current revision (00:29, 28 December 2023) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3f9r.png|left|200px]]
 
-
<!--
+
==Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370==
-
The line below this paragraph, containing "STRUCTURE_3f9r", creates the "Structure Box" on the page.
+
<StructureSection load='3f9r' size='340' side='right'caption='[[3f9r]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3f9r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F9R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3F9R FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_3f9r| PDB=3f9r | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3f9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3f9r OCA], [https://pdbe.org/3f9r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3f9r RCSB], [https://www.ebi.ac.uk/pdbsum/3f9r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3f9r ProSAT]</span></td></tr>
-
 
+
</table>
-
===Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q38AW2_TRYB2 Q38AW2_TRYB2] Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.[RuleBase:RU361118]
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[3f9r]] is a 2 chain structure of [[Phosphomannomutase]] with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_brucei Trypanosoma brucei]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3F9R OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/f9/3f9r_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3f9r ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Phosphomannomutase|Phosphomannomutase]]
*[[Phosphomannomutase|Phosphomannomutase]]
-
[[Category: Phosphomannomutase]]
+
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Trypanosoma brucei]]
[[Category: Trypanosoma brucei]]
-
[[Category: Ali, A.]]
+
[[Category: Ali A]]
-
[[Category: Arrowsmith, C H.]]
+
[[Category: Arrowsmith CH]]
-
[[Category: Bandini, G.]]
+
[[Category: Bandini G]]
-
[[Category: Bochkarev, A.]]
+
[[Category: Bochkarev A]]
-
[[Category: Bountra, C.]]
+
[[Category: Bountra C]]
-
[[Category: Cossar, D.]]
+
[[Category: Cossar D]]
-
[[Category: Edwards, A M.]]
+
[[Category: Edwards AM]]
-
[[Category: Ferguson, M A.J.]]
+
[[Category: Ferguson MAJ]]
-
[[Category: Guther, L.]]
+
[[Category: Guther L]]
-
[[Category: Hui, R.]]
+
[[Category: Hui R]]
-
[[Category: Kozieradzki, I.]]
+
[[Category: Kozieradzki I]]
-
[[Category: Lam, A.]]
+
[[Category: Lam A]]
-
[[Category: Lin, Y H.]]
+
[[Category: Lin YH]]
-
[[Category: MacKenzie, F.]]
+
[[Category: MacKenzie F]]
-
[[Category: Qiu, W.]]
+
[[Category: Qiu W]]
-
[[Category: SGC, Structural Genomics Consortium.]]
+
[[Category: Schapira M]]
-
[[Category: Schapira, M.]]
+
[[Category: Shamshad A]]
-
[[Category: Shamshad, A.]]
+
[[Category: Weigelt J]]
-
[[Category: Weigelt, J.]]
+
[[Category: Wernimont AK]]
-
[[Category: Wernimont, A K.]]
+
[[Category: Zhao Y]]
-
[[Category: Zhao, Y.]]
+
-
[[Category: Isomerase]]
+
-
[[Category: Sgc]]
+
-
[[Category: Structural genomics consortium]]
+
-
[[Category: Trypanosome glycobiology structural genomic]]
+

Current revision

Crystal Structure of Trypanosoma Brucei phosphomannosemutase, TB.10.700.370

PDB ID 3f9r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools