This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yzv

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1yzv" [edit=sysop:move=sysop])
Current revision (09:01, 14 February 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yzv.png|left|200px]]
 
-
<!--
+
==HYPOTHETICAL PROTEIN FROM TRYPANOSOMA CRUZI==
-
The line below this paragraph, containing "STRUCTURE_1yzv", creates the "Structure Box" on the page.
+
<StructureSection load='1yzv' size='340' side='right'caption='[[1yzv]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1yzv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Trypanosoma_cruzi Trypanosoma cruzi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YZV FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.001&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-
{{STRUCTURE_1yzv| PDB=1yzv | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yzv OCA], [https://pdbe.org/1yzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yzv RCSB], [https://www.ebi.ac.uk/pdbsum/1yzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yzv ProSAT]</span></td></tr>
-
 
+
</table>
-
===HYPOTHETICAL PROTEIN FROM TRYPANOSOMA CRUZI===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/Q4D3U8_TRYCC Q4D3U8_TRYCC]
-
 
+
== Evolutionary Conservation ==
-
<!--
+
[[Image:Consurf_key_small.gif|200px|right]]
-
The line below this paragraph, {{ABSTRACT_PUBMED_016199669}}, adds the Publication Abstract to the page
+
Check<jmol>
-
(as it appears on PubMed at http://www.pubmed.gov), where 016199669 is the PubMed ID number.
+
<jmolCheckbox>
-
-->
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yz/1yzv_consurf.spt"</scriptWhenChecked>
-
{{ABSTRACT_PUBMED_016199669}}
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
 
+
<text>to colour the structure by Evolutionary Conservation</text>
-
==About this Structure==
+
</jmolCheckbox>
-
[[1yzv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Trypanosoma_cruzi Trypanosoma cruzi]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YZV OCA].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yzv ConSurf].
-
 
+
<div style="clear:both"></div>
-
==Reference==
+
__TOC__
-
<ref group="xtra">PMID:016199669</ref><references group="xtra"/>
+
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Trypanosoma cruzi]]
[[Category: Trypanosoma cruzi]]
-
[[Category: Caruthers, J.]]
+
[[Category: Caruthers J]]
-
[[Category: Merritt, E A.]]
+
[[Category: Merritt EA]]
-
[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Sgpp]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Structural genomics of pathogenic protozoa consortium]]
+
-
[[Category: Unknown function]]
+

Current revision

HYPOTHETICAL PROTEIN FROM TRYPANOSOMA CRUZI

PDB ID 1yzv

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yzv"
Personal tools