This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1cby

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px <!-- The line below this paragraph, containing "STRUCTURE_1cby", creates the "Structure Box" on the page. You may change the PDB parameter (which sets the PD...)
Current revision (06:42, 7 February 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1cby.png|left|200px]]
 
-
<!--
+
==DELTA-ENDOTOXIN==
-
The line below this paragraph, containing "STRUCTURE_1cby", creates the "Structure Box" on the page.
+
<StructureSection load='1cby' size='340' side='right'caption='[[1cby]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1cby]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_thuringiensis_serovar_kyushuensis Bacillus thuringiensis serovar kyushuensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CBY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CBY FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1cby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1cby OCA], [https://pdbe.org/1cby PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1cby RCSB], [https://www.ebi.ac.uk/pdbsum/1cby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1cby ProSAT]</span></td></tr>
-
{{STRUCTURE_1cby| PDB=1cby | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===DELTA-ENDOTOXIN===
+
[https://www.uniprot.org/uniprot/CT2AA_BACTY CT2AA_BACTY] Kills the larvae of dipteran insects by making pores in the epithelial cell membrane of the insect midgut.
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_8632451}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 8632451 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/1cby_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_8632451}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1cby ConSurf].
-
[[1cby]] is a 1 chain structure of [[Delta-endotoxin]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_thuringiensis_serovar_kyushuensis Bacillus thuringiensis serovar kyushuensis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CBY OCA].
+
<div style="clear:both"></div>
==See Also==
==See Also==
*[[Delta-endotoxin|Delta-endotoxin]]
*[[Delta-endotoxin|Delta-endotoxin]]
-
*[[Insecticidal delta-endotoxin Cyt2Ba from Bacillus thuringiensis|Insecticidal delta-endotoxin Cyt2Ba from Bacillus thuringiensis]]
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
-
<ref group="xtra">PMID:008632451</ref><references group="xtra"/>
+
[[Category: Bacillus thuringiensis serovar kyushuensis]]
[[Category: Bacillus thuringiensis serovar kyushuensis]]
-
[[Category: Li, J.]]
+
[[Category: Large Structures]]
-
[[Category: Cytolytic]]
+
[[Category: Li J]]
-
[[Category: Membrane pore]]
+
-
[[Category: Mosquitocidal]]
+
-
[[Category: Toxin]]
+

Current revision

DELTA-ENDOTOXIN

PDB ID 1cby

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools