3qno

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:48, 21 February 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:3qno.png|left|200px]]
 
-
<!--
+
==RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tCo==
-
The line below this paragraph, containing "STRUCTURE_3qno", creates the "Structure Box" on the page.
+
<StructureSection load='3qno' size='340' side='right'caption='[[3qno]], [[Resolution|resolution]] 1.88&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[3qno]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_RB69 Escherichia phage RB69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3QNO FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.88&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ATP:ADENOSINE-5-TRIPHOSPHATE'>ATP</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DOC:2,3-DIDEOXYCYTIDINE-5-MONOPHOSPHATE'>DOC</scene>, <scene name='pdbligand=YCO:3-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-1H-PYRIMIDO[5,4-B][1,4]BENZOXAZIN-2(3H)-ONE'>YCO</scene></td></tr>
-
{{STRUCTURE_3qno| PDB=3qno | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3qno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qno OCA], [https://pdbe.org/3qno PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3qno RCSB], [https://www.ebi.ac.uk/pdbsum/3qno PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3qno ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/DPOL_BPR69 DPOL_BPR69] This polymerase possesses two enzymatic activities: DNA synthesis (polymerase) and an exonucleolytic activity that degrades single stranded DNA in the 3'- to 5'-direction.
-
===RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tCo===
+
==See Also==
-
 
+
*[[DNA polymerase 3D structures|DNA polymerase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_22616982}}, adds the Publication Abstract to the page
+
[[Category: Escherichia phage RB69]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 22616982 is the PubMed ID number.
+
[[Category: Large Structures]]
-
-->
+
[[Category: Konigsberg WH]]
-
{{ABSTRACT_PUBMED_22616982}}
+
[[Category: Wang J]]
-
 
+
[[Category: Wang M]]
-
==About this Structure==
+
[[Category: Xia S]]
-
[[3qno]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_rb69 Enterobacteria phage rb69]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QNO OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:022616982</ref><references group="xtra"/>
+
-
[[Category: DNA-directed DNA polymerase]]
+
-
[[Category: Enterobacteria phage rb69]]
+
-
[[Category: Konigsberg, W H.]]
+
-
[[Category: Wang, J.]]
+
-
[[Category: Wang, M.]]
+
-
[[Category: Xia, S.]]
+
-
[[Category: 3tco]]
+
-
[[Category: Datp]]
+
-
[[Category: Transferase-dna complex]]
+
-
[[Category: Y567a]]
+

Current revision

RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tCo

PDB ID 3qno

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools