2oxu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2oxu" [edit=sysop:move=sysop])
Current revision (10:50, 30 August 2023) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2oxu.png|left|200px]]
 
-
<!--
+
==Uninhibited form of human MMP-12==
-
The line below this paragraph, containing "STRUCTURE_2oxu", creates the "Structure Box" on the page.
+
<StructureSection load='2oxu' size='340' side='right'caption='[[2oxu]], [[Resolution|resolution]] 1.24&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2oxu]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OXU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OXU FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.24&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2oxu| PDB=2oxu | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2oxu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2oxu OCA], [https://pdbe.org/2oxu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2oxu RCSB], [https://www.ebi.ac.uk/pdbsum/2oxu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2oxu ProSAT]</span></td></tr>
-
 
+
</table>
-
===Uninhibited form of human MMP-12===
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/MMP12_HUMAN MMP12_HUMAN] May be involved in tissue injury and remodeling. Has significant elastolytic activity. Can accept large and small amino acids at the P1' site, but has a preference for leucine. Aromatic or hydrophobic residues are preferred at the P1 site, with small hydrophobic residues (preferably alanine) occupying P3.
-
 
+
== Evolutionary Conservation ==
-
==About this Structure==
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[2oxu]] is a 1 chain structure of [[Elastase]] and [[Matrix metalloproteinase]] with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OXU OCA].
+
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ox/2oxu_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2oxu ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Elastase|Elastase]]
+
*[[Matrix metalloproteinase 3D structures|Matrix metalloproteinase 3D structures]]
-
*[[Matrix Metalloproteinase 12|Matrix Metalloproteinase 12]]
+
__TOC__
-
*[[Matrix metalloproteinase|Matrix metalloproteinase]]
+
</StructureSection>
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:017096442</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Macrophage elastase]]
+
[[Category: Large Structures]]
-
[[Category: Bertini, I.]]
+
[[Category: Bertini I]]
-
[[Category: Calderone, V.]]
+
[[Category: Calderone V]]
-
[[Category: Fragai, M.]]
+
[[Category: Fragai M]]
-
[[Category: Luchinat, C.]]
+
[[Category: Luchinat C]]
-
[[Category: Maletta, M.]]
+
[[Category: Maletta M]]
-
[[Category: Yeo, K J.]]
+
[[Category: Yeo KJ]]
-
[[Category: Hydrolase]]
+
-
[[Category: Matrix metalloproteinase]]
+
-
[[Category: Mmp-12]]
+

Current revision

Uninhibited form of human MMP-12

PDB ID 2oxu

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools